LOC122344709


Basic Information

Item Value
gene id LOC122344709
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11769860 ~ 11774612 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250923.1
tgatattaaaaaacacatttagttcAGGaagatctctctttctcactcctCCCCCTTCCTCTATTCGTTAGATGTGCTTTAACAAGCTGAATGATCAATGATTCTTAATTCCTTACAAAGATTTTTCAGACTAAAGAGAGTCCTTGAGTGAAGAGCGGCACCCAGCTCAAATAGTCAGcttcaGTGATCACTGACTCACAACAGTGACCGCTCAGCAGCTGCCTCCACCCTCCACACTGCGGCTGAGAGCGTCACAACAGCAGCGTTTCAGGCCTGATTCTCACAGAGATGTGtttgaaagaaagacagagagaaaattcTGTGATGCCTTCTAAAGAAAAGACACTTCCTTCGAAGAGACACCTCTTCTCTGTTTTTTCATCTTGTCATGCAGTTATCTCGAGTAGCCAAAatagcacatacacacaaagaaataaaaaaaaggagagaaaattatttgttttaggtATAGCTATATTTAATCAGAAGCTTGGTTCGGAGAGATCTGGGGCTTTCTTCTGCTTGTGTTGGTTCTGGTTTGGTTGCAGCTTTTTAGTATGACTAGATATACATCAGCAAAGCTTATAACCACACTAGTCATGATGACTCACATACACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250923.1 True 620 lncRNA 0.41 2 11769860 11774612

Neighbor

gene id symbol gene type direction distance location
arhgap20b LOC107672940,LOC107597255,LOC107663218,LOC107746244,LOC107573640 coding downstream 1846 11731519 ~ 11768014 (-)
LOC122345938 NA coding downstream 62144 11704231 ~ 11707716 (-)
LOC122345659 NA coding downstream 79938 11682220 ~ 11689922 (-)
rpl36a LOC100304549,LOC100219516,LOC106514001,LOC103353280 coding downstream 117144 11650439 ~ 11652716 (-)
tnfsf10l4 LOC107741286,LOC107680360,LOC107565437 coding downstream 148420 11619110 ~ 11621440 (-)
fdx1b LOC107672951,LOC107746235,LOC107597349,LOC107741288,LOC107663211 coding upstream 3000 11777612 ~ 11786143 (-)
zc3h12b LOC107741193,LOC107746237,LOC107672716,LOC107597257,LOC107663225 coding upstream 50655 11825267 ~ 11840042 (-)
shisa2a shisa2,LOC107746248,LOC107672960,LOC107597350,LOC107741289,LOC107557100 coding upstream 72515 11847127 ~ 11848955 (-)
gab3 LOC107746243,LOC107597263,LOC107672781,LOC107663235,LOC107741201 coding upstream 127710 11902322 ~ 11923009 (-)
LOC122345274 NA coding upstream 394982 12169594 ~ 12173002 (-)
G35601 NA non-coding downstream 66152 11701233 ~ 11703708 (-)
G35599 NA non-coding downstream 70194 11697948 ~ 11699666 (-)
G35597 NA non-coding downstream 72186 11696191 ~ 11697674 (-)
G35594 NA non-coding downstream 74913 11692550 ~ 11694947 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding downstream 95043 11670957 ~ 11674817 (-)
G35660 NA non-coding upstream 1193 11775805 ~ 11776113 (-)
G35690 LOC107597260,LOC107746241,LOC107672756,LOC107741198,LOC107663227,LOC107557115 non-coding upstream 92150 11866762 ~ 11871053 (-)
LOC122345280 NA non-coding upstream 404439 12179051 ~ 12179750 (-)
G35797 NA non-coding upstream 406875 12181487 ~ 12182979 (-)
G35805 NA non-coding upstream 452306 12226918 ~ 12248708 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 117233 11583780 ~ 11652627 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 302738 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 800742 10960311 ~ 10969118 (-)
G35384 NA other downstream 843697 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 895796 10868364 ~ 10874064 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 21044 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 390791 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 543191 12317803 ~ 12319685 (-)
G35936 NA other upstream 727302 12501914 ~ 12505958 (-)
G36047 NA other upstream 1279232 13053844 ~ 13054857 (-)

Expression


Co-expression Network