LOC122345280


Basic Information

Item Value
gene id LOC122345280
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12179051 ~ 12179750 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250983.1
CCAATCTGTTCAGCTAATGCTGTTTGAGATAGACAAAATATGGactgaagaagaaacaaacaaaatgaacgAATCAGCTCTAATGTCAGAAATGCAAGTGAACGATATGCATGAGCTTCAACAAATGTTGATCAGGGCTTACAGAGAAGGTTCTTTCAGTTGGAGATGAGAGAATTGACTTGGACAGAACCTCAGTGGTTggacaaagacaaaacaaactctttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250983.1 True 225 lncRNA 0.38 3 12179051 12179750

Neighbor

gene id symbol gene type direction distance location
LOC122344646 NA coding downstream 1836 12173037 ~ 12177215 (-)
LOC122345274 NA coding downstream 6049 12169594 ~ 12173002 (-)
gab3 LOC107746243,LOC107597263,LOC107672781,LOC107663235,LOC107741201 coding downstream 256042 11902322 ~ 11923009 (-)
shisa2a shisa2,LOC107746248,LOC107672960,LOC107597350,LOC107741289,LOC107557100 coding downstream 330096 11847127 ~ 11848955 (-)
zc3h12b LOC107741193,LOC107746237,LOC107672716,LOC107597257,LOC107663225 coding downstream 339009 11825267 ~ 11840042 (-)
LOC122345275 LOC107597264,LOC107672815,LOC107742671 coding upstream 10952 12190702 ~ 12196377 (-)
LOC122344659 NA coding upstream 92467 12272217 ~ 12273638 (-)
LOC122345273 NA coding upstream 177086 12356836 ~ 12363715 (-)
arhgap25 LOC107741203,LOC107557123,LOC107663229,LOC107654642,LOC107743332,LOC107597266 coding upstream 201614 12381364 ~ 12394042 (-)
cds2 cds2,LOC107597267,LOC107654641,LOC107741205,LOC107663217 coding upstream 216532 12396282 ~ 12409668 (-)
G35690 LOC107597260,LOC107746241,LOC107672756,LOC107741198,LOC107663227,LOC107557115 non-coding downstream 307998 11866762 ~ 11871053 (-)
G35660 NA non-coding downstream 402938 11775805 ~ 11776113 (-)
LOC122344709 NA non-coding downstream 404439 11769860 ~ 11774612 (-)
G35601 NA non-coding downstream 475343 11701233 ~ 11703708 (-)
G35599 NA non-coding downstream 479385 11697948 ~ 11699666 (-)
G35797 NA non-coding upstream 1737 12181487 ~ 12182979 (-)
G35805 NA non-coding upstream 47168 12226918 ~ 12248708 (-)
G35804 NA non-coding upstream 48832 12228582 ~ 12247509 (-)
G35812 arhgap25,LOC107597266,LOC107743332,LOC107654642 non-coding upstream 75730 12255480 ~ 12256812 (-)
G35922 LOC107696053,LOC107654639,LOC107743336,LOC107595973 non-coding upstream 264037 12443787 ~ 12445220 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 9641 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 363107 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 526424 11583780 ~ 11652627 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 711929 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 1209933 10960311 ~ 10969118 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 138053 12317803 ~ 12319685 (-)
G35936 NA other upstream 322164 12501914 ~ 12505958 (-)
G36047 NA other upstream 874094 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 1399311 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 1474544 13654294 ~ 13699226 (-)

Expression


Co-expression Network