LOC122345654


Basic Information

Item Value
gene id LOC122345654
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7450377 ~ 7460111 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251018.1
AGTGTTTATCTACACTTCAAGTTTTCCAACGAAATGATTCAGGTCAATATAATTTTTCAGCTGCAAGCGCGTGGCAGCGCGTGGTTGCCAGCCTCCACAGATCATTGATCTGCTCAAAATTAAAACTTATGACTGATATTTCTGAGGTGGAATTCCAAGAATATGAATACAACACACTGGCCCATGCATGTGACCTTCTTCATAAGCAGTTTGAGGAAGGGCAGGAGACAAAGGCTGAGCTGCAGCGAGGAATGTCAAAGGCCAACAGCGAAGTTGCTTAGTGaagaagaaaatatgaaaatgacgCCATCCAGCACACTGAGGAGCTTGAAGAGGCCAAGAAGAAGTTGGCTCAGTGTCTACAGAAGGCAAAAAAACAATCTGAGGCCATAGACTCCAAATGTGCCTCTCTGGAGAAGACCACCTATGGTGAGGTCCAATCAGGACCTCGTGATTGATGTGGAGAGAACCAATGCTTTGGCTGCCAACCTTGacaaaaaagtaagaaatatGAGTTATTATATGAGATTCTCTTTCTAAATCATTGCTGCAATGGGTTTTGAAGATGGTATAAACAAGCTTGAGCTTGAAATATCTTCATCAAAGGTAGAATGAAAGTAGAAATATGAGGAAGGCTCATAAGAATGTATCttctgtaaattattaaatgaaaccCTATTATTCACCTTTTTTCATTCACATCTGATTTTCAAGAGTGTTGAATATGGagttttaaatgcatctttgctaTAAA
>XR_006251019.1
AGTGTTTATCTACACTTCAAGTTTTCCAACGAAATGATTCAGGTCAATATAATTTTTCAGCTGCAAGCGCGTGGCAGCGCGTGGTTGCCAGCCTCCACAGATCATTGATCTGCTCAAAATTAAAACTTATGACTGATATTTCTGAGGTGGAATTCCAAGAATATGAATACAACACACTGGCCCATGCATGTGACCTTCTTCATAAGCAGTTTGAGGAAGGGCAGGAGACAAAGGCTGAGCTGCAGCGAGGAATGTCAAAGGCCAACAGCGAAGTTGCTTAGTGaagaagaaaatatgaaaatgacgCCATCCAGCACACTGAGGAGCTTGAAGAGGCCAAGTATGAACATCATAAGAAGAAGAAGTTGGCTCAGTGTCTACAGAAGGCAAAAAAACAATCTGAGGCCATAGACTCCAAATGTGCCTCTCTGGAGAAGACCACCTATGGTGAGGTCCAATCAGGACCTCGTGATTGATGTGGAGAGAACCAATGCTTTGGCTGCCAACCTTGacaaaaaagtaagaaatatGAGTTATTATATGAGATTCTCTTTCTAAATCATTGCTGCAATGGGTTTTGAAGATGGTATAAACAAGCTTGAGCTTGAAATATCTTCATCAAAGGTAGAATGAAAGTAGAAATATGAGGAAGGCTCATAAGAATGTATCttctgtaaattattaaatgaaaccCTATTATTCACCTTTTTTCATTCACATCTGATTTTCAAGAGTGTTGAATATGGagttttaaatgcatctttgctaTAAA

Function

GO:

id name namespace
GO:0014823 response to activity biological_process
GO:0005488 binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251018.1 False 754 lncRNA 0.40 3 7450377 7460111
XR_006251019.1 True 772 lncRNA 0.39 3 7450377 7460111

Neighbor

gene id symbol gene type direction distance location
myhz2 myhz2,ns:zf-e68,myhc4,myhz1.1,myhz1.2,LOC107723326 coding downstream 919 7438835 ~ 7449458 (-)
LOC122345653 myhz2,ns:zf-e68,myhz1.1,myhc4,myhz1.2 coding downstream 20911 7419287 ~ 7429466 (-)
c9 c9,LOC107691041 coding downstream 106240 7340212 ~ 7344137 (-)
ndor1 ndor1,LOC107740959 coding downstream 164346 7280445 ~ 7286031 (-)
ier5l ier5l,LOC107723335,LOC107598287,LOC107693861,LOC107691035,LOC107740934,LOC107587377 coding downstream 288017 7157494 ~ 7162360 (-)
taok3b LOC107723325,LOC107740964,LOC107598017,LOC107587450,LOC107681865,LOC108270643 coding upstream 1150 7461261 ~ 7469157 (-)
tescb tescb,LOC107598325,LOC107660769,LOC107723336,LOC107681843,LOC107740949,LOC107587384,LOC108441567 coding upstream 15157 7475268 ~ 7479804 (-)
zmat5 zmat5,LOC107723367,LOC107681867,LOC107598336,LOC107587391,LOC107740948,LOC107660772 coding upstream 41524 7501635 ~ 7504656 (-)
scai scai,LOC107740943,LOC107723359,LOC107681852 coding upstream 52206 7512317 ~ 7536783 (-)
ppp6c ppp6c,Ppp6c,LOC106570422,LOC107587376,LOC102313764,LOC102783418,LOC100701794,LOC107681855 coding upstream 77236 7537347 ~ 7540940 (-)
G33990 NA non-coding downstream 55145 7366250 ~ 7395232 (-)
G33985 LOC107691047,LOC107597997,LOC107723329,LOC107740940,LOC107693835,LOC107587379 non-coding downstream 113832 7334414 ~ 7336545 (-)
G33947 NA non-coding downstream 256164 7193976 ~ 7194213 (-)
G33816 NA non-coding downstream 399053 7050977 ~ 7051324 (-)
G33788 NA non-coding downstream 450993 6998360 ~ 6999384 (-)
LOC122345617 NA non-coding upstream 35503 7495614 ~ 7498788 (-)
G34025 LOC107587446,LOC107597252,LOC107723353 non-coding upstream 112049 7572160 ~ 7578212 (-)
G34214 NA non-coding upstream 182859 7642970 ~ 7644229 (-)
G34248 NA non-coding upstream 251932 7712043 ~ 7712494 (-)
G34231 NA non-coding upstream 257462 7717573 ~ 7760165 (-)
G33998 LOC108444092 other downstream 53224 7382346 ~ 7397153 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other downstream 507174 6922846 ~ 6943203 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other downstream 624195 6824171 ~ 6826182 (-)
G33175 NA other downstream 2827319 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 3257296 4144856 ~ 4193081 (-)
LOC122345606 LOC107712378 other upstream 246859 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 258454 7718565 ~ 7721758 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other upstream 700766 8160877 ~ 8164026 (-)
G34372 zbtb44,LOC107597664,LOC107717865,LOC107677410,LOC107587334,LOC107722796 other upstream 951771 8411882 ~ 8414806 (-)
timm8b timm8b,LOC107717885,LOC107598437 other upstream 969589 8429700 ~ 8431586 (-)

Expression


Co-expression Network