LOC122346031


Basic Information

Item Value
gene id LOC122346031
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5456097 ~ 5468031 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251080.1
CCGCGATTGTTTCTCGCAACTTCAAACGTCTTCTCGAAAGTGAGGGAAACAAAGTGGCAAATGCCACAGGAGGTCATCAACTCATAATTGCGCCGTGTTGGACTAAAATCTCAGCAATGTCGCTACTCTGCGTGCGAGtgaaaAAAGCCAAGCTGCAAGGACCTCCAGACAAGTTTAATGTGTATGTCACGTTGAAGGTCCAGAATGTTAAAAGCACAACCATCACGGTGCGAGGAGACCAGCCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251080.1 True 247 lncRNA 0.48 3 5456097 5468031

Neighbor

gene id symbol gene type direction distance location
pgam5 pgam5,LOC107597303,LOC107684980,LOC107595915,LOC107672628 coding upstream 57765 5393799 ~ 5398332 (+)
LOC122346032 hira,LOC107741257,LOC107707818,LOC107672596 coding upstream 429668 5014113 ~ 5026429 (+)
ascc2 ascc2,LOC107707848,LOC107741258,LOC107600125,LOC107548944 coding upstream 447488 5002008 ~ 5008609 (+)
chfr chfr,LOC107656818,LOC107548943,LOC107600128,LOC107672629 coding upstream 527564 4913329 ~ 4928533 (+)
LOC122344976 htr7c,LOC107707833,LOC107656814,LOC107561270,LOC107560967,LOC102292089 coding upstream 1046827 4375803 ~ 4409270 (+)
LOC122346030 LOC107684986,LOC107741279,LOC107597300,LOC107672622,LOC107595956,LOC100535393 coding downstream 35277 5503308 ~ 5547584 (+)
atp8b5a LOC107684987,LOC107741246,LOC107672607,LOC107595921,LOC105889921 coding downstream 80806 5548837 ~ 5570088 (+)
rusc2 rusc2,LOC107752133,LOC107684988,LOC107741245,LOC107595920,LOC107672606,LOC107597340 coding downstream 104280 5572311 ~ 5593179 (+)
acacb NA coding downstream 127064 5595095 ~ 5620700 (+)
ube3b ube3b,LOC107654616,LOC107752137,LOC107597296,LOC107595925,LOC107741240,LOC107672623 coding downstream 185544 5653575 ~ 5666827 (+)
G33206 ankle2,LOC107729791,LOC107597302,LOC107672626,LOC107741250,LOC107684979,LOC107595914 non-coding upstream 53313 5401315 ~ 5402784 (+)
G33257 NA non-coding upstream 85576 5368434 ~ 5370521 (+)
G33251 NA non-coding upstream 119461 5336349 ~ 5336636 (+)
G33182 NA non-coding upstream 552723 4903128 ~ 4903374 (+)
G33167 NA non-coding upstream 863245 4592596 ~ 4592852 (+)
G33348 NA non-coding downstream 1041 5469072 ~ 5539398 (+)
G33454 NA non-coding downstream 349389 5817420 ~ 5870510 (+)
G33453 NA non-coding downstream 391259 5859290 ~ 5880529 (+)
G33471 NA non-coding downstream 395301 5863332 ~ 5897366 (+)
G33492 NA non-coding downstream 611052 6079083 ~ 6079423 (+)
fbrsl1 LOC107656817,LOC107600129 other upstream 553694 4644101 ~ 4902403 (+)
G33174 NA other upstream 833037 4622507 ~ 4623060 (+)
G33015 NA other upstream 1311701 3605186 ~ 4144396 (+)
tbx1 tbx1,LOC107755862,LOC107699917,LOC107708247 other upstream 2113027 3328800 ~ 3343070 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other upstream 2806736 2627084 ~ 2649361 (+)
G33355 kctd10,LOC107595924,LOC106564472,LOC107672630,LOC107597295,LOC107752136 other downstream 136302 5604333 ~ 5649885 (+)
myo1ha myo1ha,myo1h,LOC106585663 other downstream 157236 5625267 ~ 5648047 (+)
tnpo1 tnpo1,LOC107700926,LOC107655929,LOC107596175 other downstream 491801 5959832 ~ 5982816 (+)
G33494 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 other downstream 619231 6087262 ~ 6088562 (+)
hexb hexb,LOC107718643,LOC107700931,LOC107655935,LOC107570862 other downstream 779764 6247795 ~ 6255340 (+)

Expression


Co-expression Network