LOC122346059


Basic Information

Item Value
gene id LOC122346059
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2948484 ~ 2950332 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251081.1
taaaaagtctttttctGAGAATGTGTACTGAGACTTGCAGCACTAATATATTGTGAGGTTTTTTTCCATGTCTGTTTATTGCAAggatttcttcttctttttttttacgattGCGATTTACGATAGCTTCATCTGAAATGTGAAAGGATGAGCAGTGCTAGTAGCATGCAGCAGAATGTTGTACTAAGACTGCGTTGGATGTGACAGCAAGtgcattactgtatatatttggcTGGAGCTGCCAAATGAAGTACAAGCCCCGTGTTTGCCTACGTGATAAAGCAGGTAAACGAAGCCAACCTTCCGTCTGGATTGGTTTAGAAGACTCTGCCCATGCTATGAAGCCGAAGCTGGACTTTTTGTAGAAGTCTAGAACGAATGGCAGAGGCTACGGCTGATTGAACACAGCGCGGGCTTGGCAACTCTTAAAGACTAAATGCAAAAACAGGGTGAAAGCAGAGGACATTTCATTCCGTCGACTTTGATTGTGACGACAAAtgaaggagatttttttttccgtgACCTGGCGGGTGGAGAGGCACTGCGACGCTCATCACGGATCCATACTTCGTTGCATGGTGTTCTGCAAAATATAGCGTATCGGTTTCAACGGCAAAACAATAGTCTCGTGTATTTCAAAAAAAGACGTTTTCGTAACTGTGCCTCTTCACCTCGGGTGAAGCCAAAGCAGACTGCAGACGTGTTTCTTCCGTTTCTTGTTTTTTGCGTTGctttttatcctctgtttttATGTTCTGGAGTTTGTCCATTGCACAGAACTCAAGTGTTGTCTGAACTCTTTGTTACTACTACTCTTGTTTTGGTGGAATGCTATTCTTCGTGGCATGAGAGCTTTACGATTTTCTCAAGCGGCTTTCCATTCTGTCACCGGCTCTTTTCTAGTCTGCGATCTAGTGTGCACCGCACTGCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251081.1 True 933 lncRNA 0.43 3 2948484 2950332

Neighbor

gene id symbol gene type direction distance location
kat6a kat6a,LOC107708249,LOC107697242,LOC107755858,LOC107699914,LOC107551817 coding downstream 38102 2876309 ~ 2910382 (-)
ap3m2 ap3m2,LOC107755857,LOC107551816 coding downstream 73591 2866165 ~ 2874893 (-)
tet3 LOC107654213,LOC107708251,LOC107557386,LOC107697244,LOC107551814,LOC107755856 coding downstream 82441 2824171 ~ 2866043 (-)
LOC122345702 figla coding downstream 338899 2607214 ~ 2609585 (-)
mxd1 mxd1,LOC107670395,LOC107708253 coding downstream 368681 2555476 ~ 2579803 (-)
LOC122345463 sema4c,LOC107699920,LOC107697240 coding upstream 72517 3022849 ~ 3089522 (-)
gnb1l gnb1l,LOC107708243,LOC107755863,LOC107551810 coding upstream 393227 3343559 ~ 3376526 (-)
txnrd2.2 txnrd2 coding upstream 440662 3390994 ~ 3417741 (-)
taok3a taok3,taok3a,LOC107699916,LOC107697236,LOC107708246 coding upstream 472552 3422884 ~ 3494193 (-)
si:dkey-1k23.3 LOC107560961,LOC107656799,LOC107702214,LOC107755870 coding upstream 668846 3619178 ~ 3622404 (-)
G32906 NA non-coding downstream 11546 2936481 ~ 2936938 (-)
G32881 NA non-coding downstream 150885 2749959 ~ 2797599 (-)
G32883 NA non-coding downstream 174294 2767779 ~ 2774190 (-)
G32884 NA non-coding downstream 178113 2769201 ~ 2770371 (-)
G32882 NA non-coding downstream 181713 2765283 ~ 2766771 (-)
G32910 NA non-coding upstream 32435 2982767 ~ 2984983 (-)
G32914 NA non-coding upstream 130575 3080907 ~ 3120371 (-)
G32922 NA non-coding upstream 225387 3175719 ~ 3176249 (-)
G32999 NA non-coding upstream 343274 3293606 ~ 3327241 (-)
G32998 NA non-coding upstream 390267 3340599 ~ 3343240 (-)
add2 add2,LOC107668755 other downstream 342567 2586587 ~ 2605917 (-)
snrnp27 snrnp27 other downstream 363032 2580548 ~ 2585452 (-)
G32857 NA other downstream 394338 2496504 ~ 2554146 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other downstream 925562 2020096 ~ 2022922 (-)
G32676 NA other downstream 980736 1966637 ~ 1967748 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other upstream 1130 2951462 ~ 2960177 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other upstream 794343 3744675 ~ 3752764 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other upstream 928318 3878650 ~ 3898578 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other upstream 1194524 4144856 ~ 4193081 (-)
G33175 NA other upstream 1672158 4622490 ~ 4623058 (-)

Expression


Co-expression Network