LOC122346116


Basic Information

Item Value
gene id LOC122346116
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 622283 ~ 625613 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251093.1
tttagccTCTCTCTACCTCTGGTGTAAAGAATGGCAGCATTTGAATACTGGAGCAGCAGGCAGGAGGAAATGCACAGTGGTCCAGATGGACGTTAGAAGCGAGCCACTTCAGTGAGGCTGGGCACTGCTCCCTGATCTAGATGCAGCTGGTGCAGTCCTGTGTTAAAACTGGCACACAGGAGACTGCTGGAGTCACACGGAGCCAGAGACACCAAAGGCCCTGAACCGTCCAGAGTTAATGTGTACAAACATGCTGAAGAGAGAATATGAAGGAGACCAGAGTCAAACCATGTAGACTTTGAATTGAtgtgactatttttttttttttttacgattaaACCAGCTTGACAAGTTTAGGGTAAGATTTTTGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251093.1 True 373 lncRNA 0.46 2 622283 625613

Neighbor

gene id symbol gene type direction distance location
LOC122345389 ugt2b3,zgc:172315,ugt2b1,ugt2b6,LOC107723313,LOC107725113,LOC107572263,LOC107667397 coding upstream 138860 464081 ~ 483423 (+)
LOC122345393 NA coding upstream 148348 472993 ~ 473935 (+)
LOC122345391 LOC107572263,LOC107667397,LOC107723313,LOC107725113,LOC107667542,LOC107725071 coding upstream 149312 468961 ~ 472971 (+)
LOC122345390 ugt2b3,ugt2b1,ugt2b5,LOC107667397,LOC107572263,LOC107723313,LOC107725113,LOC107704326 coding upstream 153856 464154 ~ 468427 (+)
LOC122345394 ugt2b3,ugt2b1,ugt2b5,LOC107667397,LOC107572263,LOC107723313,LOC107725113,LOC107725071 coding upstream 160004 454082 ~ 462279 (+)
slc2a11b slc2a11b,LOC107653192,LOC107550296,LOC107751419 coding downstream 6856 632469 ~ 641827 (+)
LOC122344762 gstt2,LOC107667312,LOC107723300,LOC107723302 coding downstream 16660 642273 ~ 644017 (+)
LOC122344993 LOC107723300,LOC107667312,LOC107550274 coding downstream 18642 644255 ~ 646631 (+)
hscb LOC107704372,LOC107751426,LOC107723301,LOC107667639,LOC107550281,LOC107567452 coding downstream 35988 661601 ~ 665871 (+)
scarf2 scarf2,LOC107704405,LOC107730837,LOC107566488,LOC107750756,LOC107667270,LOC107599162 coding downstream 450849 1076462 ~ 1101483 (+)
G32067 LOC107751416,LOC107579531,LOC107653145,LOC107550279,LOC107667655,LOC107723311 non-coding upstream 1244 617200 ~ 621039 (+)
G32042 ddr2l,LOC107725118,LOC107550294,LOC107723312,LOC107594585,LOC107704361,LOC107667359 non-coding upstream 61675 556725 ~ 560608 (+)
G32032 NA non-coding upstream 123383 497691 ~ 498900 (+)
G32026 NA non-coding upstream 136043 486003 ~ 486240 (+)
G32024 NA non-coding upstream 147426 474331 ~ 474857 (+)
LOC122345815 NA non-coding downstream 54017 679630 ~ 690036 (+)
G32234 NA non-coding downstream 74492 700105 ~ 700341 (+)
G32237 NA non-coding downstream 78152 703765 ~ 704188 (+)
G32280 NA non-coding downstream 424495 1050108 ~ 1050352 (+)
G32281 NA non-coding downstream 424776 1050389 ~ 1050614 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 170918 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 174797 432779 ~ 447486 (+)
susd1 susd1,LOC107594557,LOC107704917,LOC107572260,LOC107667560 other upstream 190818 419242 ~ 431465 (+)
G32004 LOC107725159,LOC107594583,LOC107704910,LOC107667568 other upstream 214622 402573 ~ 407661 (+)
rchy1 LOC107725104,LOC107723308 other upstream 227819 389910 ~ 394464 (+)
G32277 NA other downstream 429580 1055193 ~ 1057153 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other downstream 486651 1112264 ~ 1115405 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other downstream 1166215 1791828 ~ 1793266 (+)
G32611 prrc2b,LOC107704672 other downstream 1197041 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 1209535 1835148 ~ 1843013 (+)

Expression


Co-expression Network