G43173


Basic Information

Item Value
gene id G43173
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 6018440 ~ 6023510 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU63978
gaagcacaagagaaacaggtgcagtgaaaacccccggagggtgtatttattagacaatacacagaaggtgagcggtgagtccgtgcgaggagtgcggcggtgagtccgggggtggtgtagcggtgaatccggtgagtgcagcggtgagtcgtctctgtgtttcccgtgcttagtaacgtgagggagtccactgtgaggtagtaggggaagtagctcaggcaggcccgtcacgttgtagcttctgggagacaaagaaagagacaacaggttagcttgcgtttccggagtctcgtggctcactgaagccgtcgcctggccgggcttatctggcccgcggctgatgagctccaggtgtggcgaatccgtcgttgagtggctggtgtaggtgttccgtgtttgttcccagggcaacgctgatcgatcctcgggacgctcgtcacaatatGTA
>TU63979
gaagcacaagagaaacaggtgcagtgaaaacccccggagggtgtatttattagacaatacacagaaggtgagcggtgagtccgtgcgaggagtgcggcggtgagtccgggggtggtgtagcggtgaatccggtgagtgcagcggtgagtcgtctctgtgtttcccgtgcttagtaacgtgagggagtccactgtgaggtagtaggggaagtagctcaggcaggcccgtcacgttgtagcttctgggagacaaagaaagagacaacaggttagcttgcgtttccggagtctcgtggctcactgaagccgtcgcctggccgggcttatctggcccgcggctgatgagctccaggtgtggcgaatccgtcgttgagtggctggtgtaggtgttccgtgtttgttcccagggcaacgctgatcgatcctcgggacgctcgtcacaatatGTA

Function

NR:

description
PREDICTED: la-related protein 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63978 True 448 lncRNA 0.57 2 6018440 6023510
TU63979 False 448 lncRNA 0.57 2 6018440 6023510

Neighbor

gene id symbol gene type direction distance location
cryba2a cryba2a,LOC107748546,LOC107566796,LOC107688845,LOC107566327,LOC107705612,LOC108437841 coding downstream 86803 5930330 ~ 5931637 (-)
chpfb LOC107748547,LOC107688915,LOC794660,LOC107705610 coding downstream 107696 5901138 ~ 5910744 (-)
LOC122346765 LOC107748549,LOC107688847,LOC107555454 coding downstream 181379 5831984 ~ 5837061 (-)
LOC122346764 mylkb,LOC107748549,LOC107688847,LOC107555454,LOC107566310,LOC107705608,LOC107660138 coding downstream 248114 5757002 ~ 5770326 (-)
fmnl2b fmnl2b,LOC107688848,LOC107660092,LOC107705607,LOC107566322 coding downstream 296793 5701022 ~ 5721647 (-)
LOC122346771 ptprnb,LOC107748541,LOC107688841,LOC107705616,LOC107660007 coding upstream 34688 6058198 ~ 6121716 (-)
LOC122346636 LOC107660146,LOC107596333,LOC107738313,LOC107688886 coding upstream 232397 6255907 ~ 6259318 (-)
LOC122346556 si:ch73-23l24.1,LOC107748583,LOC107559918,LOC107688887,LOC108437696,LOC108272416 coding upstream 237350 6260860 ~ 6267795 (-)
LOC122347608 gbx2,LOC107586371,LOC107688907,LOC107596335,LOC107677618 coding upstream 426263 6449773 ~ 6452200 (-)
gca LOC107688840,LOC107596329,LOC107660144,LOC107748540,LOC107705618,LOC108437831 coding upstream 460263 6483773 ~ 6488937 (-)
LOC122346634 fmnl2,fmnl2a,LOC108273365,LOC108443439 non-coding downstream 262976 5747766 ~ 5755464 (-)
LOC122346635 NA non-coding downstream 271046 5745439 ~ 5747394 (-)
G43019 NA non-coding downstream 363482 5654221 ~ 5654958 (-)
LOC122346705 NA non-coding downstream 779745 5236821 ~ 5238695 (-)
LOC122346706 NA non-coding downstream 826441 5185601 ~ 5191999 (-)
G43251 NA non-coding upstream 791750 6815260 ~ 6823021 (-)
G43472 NA non-coding upstream 1406268 7429778 ~ 7430446 (-)
G43478 NA non-coding upstream 1437681 7461191 ~ 7498435 (-)
G43516 NA non-coding upstream 1774614 7798124 ~ 7799697 (-)
G43528 NA non-coding upstream 1832955 7856465 ~ 7857596 (-)
desmb desmb,LOC107566324,LOC107660100,LOC107705613,LOC107688844,LOC107566784,LOC107748575 other downstream 51836 5958793 ~ 5966604 (-)
mylkb mylkb,LOC107688847,LOC107748549,LOC107555454,LOC107705608,LOC107566310,LOC107660138 other downstream 281820 5723468 ~ 5736620 (-)
arl6ip6 LOC107688850,LOC107748576,LOC107705609,LOC107660093,LOC107566311,LOC107555419 other downstream 318790 5691481 ~ 5699650 (-)
adam23a adam23,adam23a,LOC107748557,LOC107705602,LOC107660086,LOC107688856 other downstream 378514 5622686 ~ 5639926 (-)
G42958 LOC107742327 other downstream 787730 5229456 ~ 5230710 (-)
cacnb4b cacnb4b,LOC107566792,LOC107688838,LOC107748538,LOC107705621,LOC107660102,LOC107596307 other upstream 18366 6041876 ~ 6524950 (-)
G43180 nck2b,LOC107688832,LOC107748532,LOC107660111,LOC107738306 other upstream 249813 6273323 ~ 6301137 (-)
G43248 pou3f3b,LOC107688836,LOC107559920,LOC107660107,LOC106574614 other upstream 780548 6804058 ~ 6827728 (-)
trim63a trim63a,murf1,LOC107586317,LOC105896535 other upstream 977605 7001115 ~ 7027427 (-)
agap1 agap1,LOC107688827,LOC107709574,LOC107677621,LOC107748916,LOC107586321,LOC103044997 other upstream 1084652 7108162 ~ 7245179 (-)

Expression


Co-expression Network