G43463 (nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882)


Basic Information

Item Value
gene id G43463
gene name nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 7579895 ~ 7586367 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU64423
CCAGCGCTGCACGATGGGTGGAATTAAGGAGCTAACGATTCTTATTCTATCTTTCCTGTACGTGACATTTGTGAATGGTACTGATGATATTTTGGTAGGCTGCGGGGGCTTTGTTAAGTCAGATGTGGAAATTAACTACTCTGTCATTGAGATCAAACTTTACACTAAACAGGGCTCTCTGAAATATCAGACTGACTGTGCACCAATCAATGGTTACTTCATGATCCTCTCTATGACAAGGGTGATTTTGTTATAAAGATAGAACCACCATCAGGATGGAGCTTTGAGCCAACAACTGTGGACCTGCATGTGGATGGAATTACAGACATCTGCACTAAAGAACAAGATATCAACTTTGTTTTTACGGGTTTTCGGTCCTCGGAACTatattaagtaaaggGCATTTGTTGGGACCTGCAGGGGTTGAAGTAAGTTTGAGAAAAGCAGGAGAAGCTGATGTCCTTCAAAGTGTCCTCACACAAGCTGGAGGCCAGTATACTTTCCTCAAGGTGCTTCCGGGAAGTTATGACATCACCGCCACTCACGCCTCATGGACCCTTGAGCAGAGCTCAACTGCTGTGGTTGTGTCAAACGAAAACGCCCCCGCCGCAGCTCCTCTTGTGGTAAAGGGTTACGATGTCTCTGGAGAGGTGCAGAGTGACAGTGAACCCATGAAAGGAGTCGGCTTCCTCCTTTACTCTGCCAGCGTAACACAGGAGgatATCAGTGGCTGCAGTGTGGCCCCTGTGGATGGAGCTGTAGTCGGCGACCCCGcgcttgtgtttttgtgcagttcCCAGTCTCGTGAGGATGGTACTTTCTCATTCCCCTGCCTTCCCAGTGGCGAATATACAGTGGTCCCATATTACAGAGGGGAGAGAATCACATTCGATGTTGCTCCTTCTCGCATGGATTTCAAAGTAGAACACAGCAGTTTAACGTTGGAGCCAATATTTCGTGTCATGGGATTCTCTGTGATGGGCAGAGTTCTGAATAGCCCCAATGGAGAAGGTGTCGCAGATGCTGTAGTAACACTTAACAACCAAATTACAGTGGAAACTAAAGACGATGGTTCGTTCAGATTGGAAAATATGACCACAGGCACTTATACTATTAACACGCACAAGGAGCTGATGTTCTTTGAGCCAGTCACTGTGAAGATTGCTCCCAGCACCCCTCAGCTGCCAGACATCATCACTGCAGGGTTTAGCGTGTGTGGTCACATCTCAGTCACTCGTCTTCCTGAAACCGTTAAACAGCTT
>TU64424
tgtatataaaatgaaaatttaaatataaaatatgaaattagcGAGTCCTGCTTTTCGGCAATATTTGATCTGGTgggttttgtatttgtttgtgttaataCGGATTACAATCTTTTACAGGGTGATTTTGTTATAAAGATAGAACCACCATCAGGATGGAGCTTTGAGCCAACAACTGTGGACCTGCATGTGGATGGAATTACAGACATCTGCACTAAAGAACAAGATATCAACTTTGTTTTTACGGGTTTTCGGTCCTCGGAACTatattaagtaaaggGCATTTGTTGGGACCTGCAGGGGTTGAAGTAAGTTTGAGAAAAGCAGGAGAAGCTGATGTCCTTCAAAGTGTCCTCACACAAGCTGGAGGCCAGTATACTTTCCTCAAGGTGCTTCCGGGAAGTTATGACATCACCGCCACTCACGCCTCATGGACCCTTGAGCAGAGCTCAACTGCTGTGGTTGTGTCAAACGAAAACGCCCCCGCCGCAGCTCCTCTTGTGGTAAAGGGTTACGATGTCTCTGGAGAGGTGCAGAGTGACAGTGAACCCATGAAAGGAGTCGGCTTCCTCCTTTACTCTGCCAGCGTAACACAGGAGgatATCAGTGGCTGCAGTGTGGCCCCTGTGGATGGAGCTGTAGTCGGCGACCCCGcgcttgtgtttttgtgcagttcCCAGTCTCGTGAGGATGGTACTTTCTCATTCCCCTGCCTTCCCAGTGGCGAATATACAGTGGTCCCATATTACAGAGGGGAGAGAATCACATTCGATGTTGCTCCTTCTCGCATGGATTTCAAAGTAGAACACAGCAGTTTAACGTTGGAGCCAATATTTCGTGTCATGGGATTCTCTGTGATGGGCAGAGTTCTGAATAGCCCCAATGGAGAAGGTGTCGCAGATGCTGTAGTAACACTTAACAACCAAATTACAGTGGAAACTAAAGACGATGGTTCGTTCAGATTGGAAAATATGACCACAGGCACTTATACTATTAACACGCACAAGGAGCTGATGTTCTTTGAGCCAGTCACTGTGAAGATTGCTCCCAGCACCCCTCAGCTGCCAGACATCATCACTGCAGGGTTTAGCGTGTGTGGTCACATCTCAGTCACTCGTCTTCCTGAAACCGTTAAACAGCTT
>TU64425
CCAGCGCTGCACGATGGGTGGAATTAAGGAGCTAACGATTCTTATTCTATCTTTCCTGTACGTGACATTTGTGAATGGTACTGATGATATTTTGGGTGATTTTGTTATAAAGATAGAACCACCATCAGGATGGAGCTTTGAGCCAACAACTGTGGACCTGCATGTGGATGGAATTACAGACATCTGCACTAAAGAACAAGATATCAACTTTGTTTTTACGGGTTTTCGGTCCTCGGAACTatattaagtaaaggGCATTTGTTGGGACCTGCAGGGGTTGAAGTAAGTTTGAGAAAAGCAGGAGAAGCTGATGTCCTTCAAAGTGTCCTCACACAAGCTGGAGGCCAGTATACTTTCCTCAAGGTGCTTCCGGGAAGTTATGACATCACCGCCACTCACGCCTCATGGACCCTTGAGCAGAGCTCAACTGCTGTGGTTGTGTCAAACGAAAACGCCCCCGCCGCAGCTCCTCTTGTGGTAAAGGGTTACGATGTCTCTGGAGAGGTGCAGAGTGACAGTGAACCCATGAAAGGAGTCGGCTTCCTCCTTTACTCTGCCAGCGTAACACAGGAGgatATCAGTGGCTGCAGTGTGGCCCCTGTGGATGGAGCTGTAGTCGGCGACCCCGcgcttgtgtttttgtgcagttcCCAGTCTCGTGAGGATGGTACTTTCTCATTCCCCTGCCTTCCCAGTGGCGAATATACAGTGGTCCCATATTACAGAGGGGAGAGAATCACATTCGATGTTGCTCCTTCTCGCATGGATTTCAAAGTAGAACACAGCAGTTTAACGTTGGAGCCAATATTTCGTGTCATGGGATTCTCTGTGATGGGCAGAGTTCTGAATAGCCCCAATGGAGAAGGTGTCGCAGATGCTGTAGTAACACTTAACAACCAAATTACAGTGGAAACTAAAGACGATGGTTCGTTCAGATTGGAAAATATGACCACAGGCACTTATACTATTAACACGCACAAGGAGCTGATGTTCTTTGAGCCAGTCACTGTGAAGATTGCTCCCAGCACCCCTCAGCTGCCAGACATCATCACTGCAGGGTTTAGCGTGTGTGGTCACATCTCAGTCACTCGTCTTCCTGAAACCGTTAAACAGCTT

Function

symbol description
nomo Predicted to enable carbohydrate binding activity. Involved in negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry. Acts upstream of or within regulation of signal transduction. Located in endoplasmic reticulum membrane. Is expressed in several structures, including heart; liver; mesoderm; nervous system; and pleuroperitoneal region. Orthologous to human NOMO1 (NODAL modulator 1); NOMO2 (NODAL modulator 2); and NOMO3 (NODAL modulator 3).

NR:

description
PREDICTED: nodal modulator 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64423 True 1262 TUCP 0.47 12 7579895 7586367
TU64424 False 1142 TUCP 0.46 10 7579895 7583120
TU64425 False 1116 TUCP 0.48 11 7579895 7586367

Neighbor

gene id symbol gene type direction distance location
LOC122346455 tns1a,LOC107688818,LOC107709585,LOC107562221,LOC107663075,LOC107586330,LOC107719294 coding downstream 191596 7385719 ~ 7388299 (-)
col18a1b LOC107709584,LOC107586328,LOC107688819 coding downstream 197090 7356348 ~ 7382805 (-)
LOC122347322 zgc:162999,LOC107586326,LOC107562228,LOC107688822,LOC108438154,LOC107709582,LOC107677632,LOC107719292 coding downstream 242007 7333023 ~ 7337888 (-)
psmb3 psmb3,LOC107688824,LOC102792592 coding downstream 307418 7269271 ~ 7272477 (-)
slc19a2 slc19a2,LOC107586324 coding downstream 319124 7254864 ~ 7260771 (-)
tns1a tns1a,LOC107688818,LOC107709585,LOC107663075,LOC107719294,LOC107586330 coding upstream 22106 7608473 ~ 7659200 (-)
LOC122347094 tns1a,LOC107688818,LOC107709585,LOC107719294,LOC107562221,LOC107663075 coding upstream 75097 7661464 ~ 7695119 (-)
LOC122346795 igfbp2,igfbp2a,LOC107688817,LOC107731775,LOC107719297,LOC107663074,LOC108438161 coding upstream 139036 7725403 ~ 7732324 (-)
LOC122347101 igfbp2,igfbp2a,LOC107731775,LOC107688817,LOC107719297,LOC107663074,LOC108438161 coding upstream 379381 7965748 ~ 7980089 (-)
inha inha,LOC107731770,LOC107688903,LOC107719299,LOC107694906,LOC107569459,LOC107586362 coding upstream 426758 8013125 ~ 8015759 (-)
G43478 NA non-coding downstream 81460 7461191 ~ 7498435 (-)
G43472 NA non-coding downstream 149449 7429778 ~ 7430446 (-)
G43251 NA non-coding downstream 756874 6815260 ~ 6823021 (-)
G43161 NA non-coding downstream 1096502 5995956 ~ 6483393 (-)
G43173 NA non-coding downstream 1556385 6018440 ~ 6023510 (-)
G43516 NA non-coding upstream 211757 7798124 ~ 7799697 (-)
G43528 NA non-coding upstream 270098 7856465 ~ 7857596 (-)
G43513 LOC107688815 non-coding upstream 463030 8049397 ~ 8050678 (-)
G43660 NA non-coding upstream 596312 8182679 ~ 8182882 (-)
G43691 NA non-coding upstream 707687 8294054 ~ 8294286 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other downstream 250330 7316947 ~ 7329565 (-)
LOC122346787 unc80,LOC107733373,LOC107677624,LOC107688825 other downstream 265121 7274840 ~ 7314774 (-)
agap1 agap1,LOC107688827,LOC107709574,LOC107677621,LOC107748916,LOC107586321,LOC103044997 other downstream 334716 7108162 ~ 7245179 (-)
trim63a trim63a,murf1,LOC107586317,LOC105896535 other downstream 552468 7001115 ~ 7027427 (-)
G43248 pou3f3b,LOC107688836,LOC107559920,LOC107660107,LOC106574614 other downstream 752167 6804058 ~ 6827728 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other upstream 150723 7737090 ~ 7770451 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other upstream 460735 8047102 ~ 8048008 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other upstream 1122339 8708706 ~ 8713858 (-)
G43890 NA other upstream 1674249 9260616 ~ 9261245 (-)
G43896 NA other upstream 1679635 9266002 ~ 9267324 (-)

Expression


Co-expression Network