G43472


Basic Information

Item Value
gene id G43472
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 7429778 ~ 7430446 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU64450
GATGCGTGGAGCTGACTTTGCAATGTTAGACATTTAGCTGAGGATACATGCGAGTTCAGAACATTTACAgatCAAAATGTGCGGTCTATTAAGgtagtcatttttaatcattggCCTGTTGGAAGTTGGACAGAGGTGAATGCTTACACACAGAGAATGTCAGCTCGTAGCTGTTTAACGCACATCTCAGCACCCAGTAGTTAACACCACACATGCCTTAGGATTTACTGGCTCATGCAGTCGCTTGTTTGTCGCCGTTCTTTGGAATACTTCGAAGCCTTCCAGCTGTGAAGTTTGAGGATCGACATCATTAAATAGTTCAGCTTTACACCGTCGTTATTGCTGTAACATGGTTGAAATGATTCCATGCAACGAAAGGACAGAGAGGACGTTAAGGAGGACACGAGGACTGATGGCAATGGACACACTGTGGAA

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64450 True 435 lncRNA 0.44 2 7429778 7430446

Neighbor

gene id symbol gene type direction distance location
LOC122346455 tns1a,LOC107688818,LOC107709585,LOC107562221,LOC107663075,LOC107586330,LOC107719294 coding downstream 41479 7385719 ~ 7388299 (-)
col18a1b LOC107709584,LOC107586328,LOC107688819 coding downstream 46973 7356348 ~ 7382805 (-)
LOC122347322 zgc:162999,LOC107586326,LOC107562228,LOC107688822,LOC108438154,LOC107709582,LOC107677632,LOC107719292 coding downstream 91890 7333023 ~ 7337888 (-)
psmb3 psmb3,LOC107688824,LOC102792592 coding downstream 157301 7269271 ~ 7272477 (-)
slc19a2 slc19a2,LOC107586324 coding downstream 169007 7254864 ~ 7260771 (-)
tns1a tns1a,LOC107688818,LOC107709585,LOC107663075,LOC107719294,LOC107586330 coding upstream 178027 7608473 ~ 7659200 (-)
LOC122347094 tns1a,LOC107688818,LOC107709585,LOC107719294,LOC107562221,LOC107663075 coding upstream 231018 7661464 ~ 7695119 (-)
LOC122346795 igfbp2,igfbp2a,LOC107688817,LOC107731775,LOC107719297,LOC107663074,LOC108438161 coding upstream 294957 7725403 ~ 7732324 (-)
LOC122347101 igfbp2,igfbp2a,LOC107731775,LOC107688817,LOC107719297,LOC107663074,LOC108438161 coding upstream 535302 7965748 ~ 7980089 (-)
inha inha,LOC107731770,LOC107688903,LOC107719299,LOC107694906,LOC107569459,LOC107586362 coding upstream 582679 8013125 ~ 8015759 (-)
G43251 NA non-coding downstream 606757 6815260 ~ 6823021 (-)
G43161 NA non-coding downstream 946385 5995956 ~ 6483393 (-)
G43173 NA non-coding downstream 1406268 6018440 ~ 6023510 (-)
LOC122346634 fmnl2,fmnl2a,LOC108273365,LOC108443439 non-coding downstream 1674314 5747766 ~ 5755464 (-)
LOC122346635 NA non-coding downstream 1682384 5745439 ~ 5747394 (-)
G43478 NA non-coding upstream 30745 7461191 ~ 7498435 (-)
G43516 NA non-coding upstream 367678 7798124 ~ 7799697 (-)
G43528 NA non-coding upstream 426019 7856465 ~ 7857596 (-)
G43513 LOC107688815 non-coding upstream 618951 8049397 ~ 8050678 (-)
G43660 NA non-coding upstream 752233 8182679 ~ 8182882 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other downstream 100213 7316947 ~ 7329565 (-)
LOC122346787 unc80,LOC107733373,LOC107677624,LOC107688825 other downstream 115004 7274840 ~ 7314774 (-)
agap1 agap1,LOC107688827,LOC107709574,LOC107677621,LOC107748916,LOC107586321,LOC103044997 other downstream 184599 7108162 ~ 7245179 (-)
trim63a trim63a,murf1,LOC107586317,LOC105896535 other downstream 402351 7001115 ~ 7027427 (-)
G43248 pou3f3b,LOC107688836,LOC107559920,LOC107660107,LOC106574614 other downstream 602050 6804058 ~ 6827728 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other upstream 149449 7579895 ~ 7586367 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other upstream 306644 7737090 ~ 7770451 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other upstream 616656 8047102 ~ 8048008 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other upstream 1278260 8708706 ~ 8713858 (-)
G43890 NA other upstream 1830170 9260616 ~ 9261245 (-)

Expression


Co-expression Network