G43528


Basic Information

Item Value
gene id G43528
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 7856465 ~ 7857596 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU64529
TCCCTTTTcagaataatgtattttaaagataatttagtcaatattttcacactttttatACATCAAACCATAGACATTAAAGAGGCCCGCTGACTCAGATGTGGCCAGAGCAATAAACTGCAATATCCGTACTGTAAGATGCCTAAGGGAGACAGGAAGGACAGCTGTTCTTCCTTTCAGTGGCAAACCACATGTAACCTTGCGTCCCCCTAGACGTGTTTGTGTAATTGAAAATTCAAGAGTGGTGTAACCTCTCACATGGAAGAGCCGCGTTTACAATTTTTGTGAGGATAAATAacgttaaacattttttttttgcaaacattgtTAACTGCATATTTAGCTGTTTACATAGACGTTAATAATAactcatttaaatacacattttataaagcattaaatCAACAAGCGGTGCACTCTTGTCAGTTTGCCCTAGCCGTGGTTTAATGATGTAACTCCTTGATGATGCATGCAGGAGATATCAGATGTGCATCTGTCTTCTCATCCTCATCGATGAGATGCTGAATATAACACGAGGTTCCTACTAAAACATGGCCAGTAGTCTGCATAGTGAAGAGAGTCCATCTTAGAGCTTCCCttttaacagaaagaaaaagaagatcaGTGAGACAAAAGCGTTTTGTGTTTACTTTCTATAATATAGTTTAGTATATTACCTTTGTCaaagatcatttattatctGTCTACTGTTTATACACGCACTTTGTGTGCATTTGAATGTCCGTTGAATAAGTATATGTTTTTATGGTGGCACACAAACTGGTCTTCACCAAATCTGCTTGTTAGCAAATATGTCTCAACTTCGAAACGAATCCCGTAGCATTCTTTTCGCCTTGTAGCACTGCAAGTCGTACGACACAGAATACATTCCATACAGTGTCGCCTGCACGTTCAGGCAGCCAATAAAGTCCTGCGGGTGATTTTTGTAAAGATCAAAAGTCAGTTTGGCAACatctttccttgtttttttccagCCACATCCAGGATAGCTCTTGGTTGATTGTTT

Function

GO:

id name namespace
GO:0005811 lipid droplet cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU64529 True 1027 lncRNA 0.38 2 7856465 7857596

Neighbor

gene id symbol gene type direction distance location
LOC122346795 igfbp2,igfbp2a,LOC107688817,LOC107731775,LOC107719297,LOC107663074,LOC108438161 coding downstream 124141 7725403 ~ 7732324 (-)
LOC122347094 tns1a,LOC107688818,LOC107709585,LOC107719294,LOC107562221,LOC107663075 coding downstream 161346 7661464 ~ 7695119 (-)
tns1a tns1a,LOC107688818,LOC107709585,LOC107663075,LOC107719294,LOC107586330 coding downstream 197265 7608473 ~ 7659200 (-)
LOC122346455 tns1a,LOC107688818,LOC107709585,LOC107562221,LOC107663075,LOC107586330,LOC107719294 coding downstream 468166 7385719 ~ 7388299 (-)
col18a1b LOC107709584,LOC107586328,LOC107688819 coding downstream 473660 7356348 ~ 7382805 (-)
LOC122347101 igfbp2,igfbp2a,LOC107731775,LOC107688817,LOC107719297,LOC107663074,LOC108438161 coding upstream 108152 7965748 ~ 7980089 (-)
inha inha,LOC107731770,LOC107688903,LOC107719299,LOC107694906,LOC107569459,LOC107586362 coding upstream 155529 8013125 ~ 8015759 (-)
cacng1a cacng1a,cacng1,LOC107586374,LOC107688902,LOC107716892,LOC107569457 coding upstream 325419 8183015 ~ 8188384 (-)
cacng4a LOC107688901,LOC107586376,LOC107716888 coding upstream 341515 8199111 ~ 8202841 (-)
psmd12 psmd12,LOC107688808,LOC107694910 coding upstream 345383 8202979 ~ 8206792 (-)
G43516 NA non-coding downstream 56768 7798124 ~ 7799697 (-)
G43478 NA non-coding downstream 358030 7461191 ~ 7498435 (-)
G43472 NA non-coding downstream 426019 7429778 ~ 7430446 (-)
G43251 NA non-coding downstream 1033444 6815260 ~ 6823021 (-)
G43161 NA non-coding downstream 1373072 5995956 ~ 6483393 (-)
G43513 LOC107688815 non-coding upstream 191801 8049397 ~ 8050678 (-)
G43660 NA non-coding upstream 325083 8182679 ~ 8182882 (-)
G43691 NA non-coding upstream 436458 8294054 ~ 8294286 (-)
G43697 NA non-coding upstream 456827 8314423 ~ 8314623 (-)
G43700 NA non-coding upstream 476766 8334362 ~ 8343514 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other downstream 86014 7737090 ~ 7770451 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other downstream 270098 7579895 ~ 7586367 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other downstream 526900 7316947 ~ 7329565 (-)
LOC122346787 unc80,LOC107733373,LOC107677624,LOC107688825 other downstream 541691 7274840 ~ 7314774 (-)
agap1 agap1,LOC107688827,LOC107709574,LOC107677621,LOC107748916,LOC107586321,LOC103044997 other downstream 611286 7108162 ~ 7245179 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other upstream 189506 8047102 ~ 8048008 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other upstream 851110 8708706 ~ 8713858 (-)
G43890 NA other upstream 1403020 9260616 ~ 9261245 (-)
G43896 NA other upstream 1408406 9266002 ~ 9267324 (-)
G43899 NA other upstream 1411592 9269188 ~ 9270922 (-)

Expression


Co-expression Network