G43800


Basic Information

Item Value
gene id G43800
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 8706786 ~ 8707974 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU64904
cagtggcctaatggataaggcactggcctcctaagccagggattgtggTTCAGTCCCATCTGGGGTGAAGcttacttttctttcttctgtgtttaTTGTGTAATTCAGCGCGCGTCAGTCGCGTTACATAAACGTTATctcgcgtgcgtgcgtgcgtccGCGGGGATTTATTTCGATGTTGTTATGTCACGAGGAAGCTCTTCCCCGACGGACTTCCcactttattttcagtttctgcGGGACTGAACGTCGCCGACACAAACATGCCGAAGAGCAGCGTCTGCGCGTTAATTGTCGCGTGCTTCGTCGCGGCAGCGGGAGGCGACAAGCTGCTGGAGCCACGGCGTACTGGGACTCGACCCACAAGGCCGTGGTGCTGAAGGAGGGCGTCCTGGACCCGCAGGGCGACGCTGCATGACGGTTACTATAACGACACGCTGTGGTCGACGGGATGGGGCGTGCTCGAGATCCGCGCGGG

Function

GO: NA

KEGG:

id description
ko04142 Lysosome
ko05150 Staphylococcus aureus infection
ko05140 Leishmaniasis
ko05323 Rheumatoid arthritis

RNA

RNA id representative length rna type GC content exon number start site end site
TU64904 True 478 lncRNA 0.58 2 8706786 8707974

Neighbor

gene id symbol gene type direction distance location
si:dkey-45d16.4 si:dkey-45d16.4,LOC107681484,LOC107569613,LOC107711600,LOC108424794,LOC103024355,LOC108273264 coding downstream 157547 8547278 ~ 8549239 (-)
LOC122346602 NA coding downstream 181793 8506768 ~ 8524993 (-)
nprl2 nprl2 coding downstream 205518 8496635 ~ 8501268 (-)
gga1 gga1,LOC107712552,LOC107656124,LOC107586353,LOC107710174,LOC107691488 coding downstream 226950 8466738 ~ 8479836 (-)
cfap100 cfap100,LOC107562886,LOC107691496 coding downstream 267401 8431444 ~ 8439385 (-)
ube2o ube2o,LOC100331775 coding upstream 149560 8857534 ~ 8883164 (-)
LOC122347059 rhbdf2 coding upstream 178534 8886508 ~ 8932433 (-)
acox1 acox1 coding upstream 225109 8933083 ~ 8951173 (-)
evpla evpl,LOC107742557 coding upstream 247282 8955256 ~ 8967380 (-)
srp68 srp68 coding upstream 263700 8971674 ~ 8995633 (-)
G43739 NA non-coding downstream 160223 8546353 ~ 8546563 (-)
G43734 NA non-coding downstream 210153 8495764 ~ 8496633 (-)
G43719 LOC108424762,LOC107710154,LOC107562891,LOC556764 non-coding downstream 240140 8460906 ~ 8466646 (-)
G43710 NA non-coding downstream 251923 8454131 ~ 8454863 (-)
G43712 NA non-coding downstream 254467 8450787 ~ 8452319 (-)
G43855 NA non-coding upstream 314545 9022519 ~ 9022881 (-)
G43856 NA non-coding upstream 317234 9025208 ~ 9025429 (-)
G43881 NA non-coding upstream 542725 9250699 ~ 9251679 (-)
G43880 NA non-coding upstream 544012 9251986 ~ 9253068 (-)
G43884 NA non-coding upstream 547752 9255726 ~ 9256009 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other downstream 658778 8047102 ~ 8048008 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other downstream 936335 7737090 ~ 7770451 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other downstream 1120419 7579895 ~ 7586367 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other downstream 1377221 7316947 ~ 7329565 (-)
LOC122346787 unc80,LOC107733373,LOC107677624,LOC107688825 other downstream 1392012 7274840 ~ 7314774 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other upstream 732 8708706 ~ 8713858 (-)
G43890 NA other upstream 552642 9260616 ~ 9261245 (-)
G43896 NA other upstream 558028 9266002 ~ 9267324 (-)
G43899 NA other upstream 561214 9269188 ~ 9270922 (-)
G43900 NA other upstream 563444 9271418 ~ 9272305 (-)

Expression


Co-expression Network