G43884


Basic Information

Item Value
gene id G43884
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9255726 ~ 9256009 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65014
ctttgtcttgctttatttctctgcgcagagaatgaaatgatctggtttacacacagtgaagtctgtgagcaaagagataacagtgagctcacagattagaggttttataggcaaaagtatacattccaaggtcgctcaaattcatctcgaaccaattgaaatagtccaaagtcacgccacccatctgtgcttacagtgtctgattgttctccagtttatctcccgtacctagcacagatagggcatcctgtactcccatgaggttgttttaacatgggtttaac

Function

GO: NA

KEGG:

id description
ko05217 Basal cell carcinoma

RNA

RNA id representative length rna type GC content exon number start site end site
TU65014 True 284 lncRNA 0.42 1 9255726 9256009

Neighbor

gene id symbol gene type direction distance location
srp68 srp68 coding downstream 260093 8971674 ~ 8995633 (-)
evpla evpl,LOC107742557 coding downstream 288346 8955256 ~ 8967380 (-)
acox1 acox1 coding downstream 304553 8933083 ~ 8951173 (-)
LOC122347059 rhbdf2 coding downstream 323293 8886508 ~ 8932433 (-)
ube2o ube2o,LOC100331775 coding downstream 372562 8857534 ~ 8883164 (-)
nol11 nol11,LOC107567930,LOC107734779,LOC107728513,LOC107660301 coding upstream 27394 9283403 ~ 9299043 (-)
si:dkey-237i9.1 LOC107567927,LOC107667603,LOC107591922,LOC107667296,LOC107731096,LOC108272757,LOC108424802 coding upstream 52577 9308586 ~ 9352668 (-)
LOC122346819 rptor,LOC107553319 coding upstream 330416 9586425 ~ 9710598 (-)
LOC122346913 nptx1,LOC107750979,LOC107553322,LOC107667295,LOC107701212 coding upstream 522241 9778250 ~ 9781983 (-)
trim25 trim25,LOC107710025,LOC107553309,LOC107669536 coding upstream 783418 10039427 ~ 10048868 (-)
G43880 NA non-coding downstream 2658 9251986 ~ 9253068 (-)
G43881 NA non-coding downstream 4047 9250699 ~ 9251679 (-)
G43856 NA non-coding downstream 230297 9025208 ~ 9025429 (-)
G43855 NA non-coding downstream 232845 9022519 ~ 9022881 (-)
G43791 NA non-coding downstream 460986 8599796 ~ 8794740 (-)
G43892 NA non-coding upstream 6394 9262403 ~ 9262609 (-)
G43894 NA non-coding upstream 8318 9264327 ~ 9264574 (-)
G43906 NA non-coding upstream 19631 9275640 ~ 9276072 (-)
G43915 NA non-coding upstream 24922 9280931 ~ 9281402 (-)
G43916 NA non-coding upstream 25506 9281515 ~ 9282468 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other downstream 541868 8708706 ~ 8713858 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other downstream 1207718 8047102 ~ 8048008 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other downstream 1485275 7737090 ~ 7770451 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other downstream 1669359 7579895 ~ 7586367 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other downstream 1926161 7316947 ~ 7329565 (-)
G43890 NA other upstream 4607 9260616 ~ 9261245 (-)
G43896 NA other upstream 9993 9266002 ~ 9267324 (-)
G43899 NA other upstream 13179 9269188 ~ 9270922 (-)
G43900 NA other upstream 15409 9271418 ~ 9272305 (-)
anapc11 anapc11,LOC107553313 other upstream 689658 9945667 ~ 9948988 (-)

Expression


Co-expression Network