G43894


Basic Information

Item Value
gene id G43894
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9264327 ~ 9264574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65024
GCGATTATCTCTTACAGTTTTAAGCACAGTAATGCAACATAAACACttccacttatttttaataaaacaatgtatCAACAATAATGCTTCATATGacttaaaatattcacattaacAACCGGATTTAATGTATTGACATACACAAGCAgggaattatattatatacatataattatatatatacaacaatcGTATTATATTCGATTCGTTTCAATTGTTGAACCTTTCACTCACACAAAAATTTACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65024 True 248 lncRNA 0.26 1 9264327 9264574

Neighbor

gene id symbol gene type direction distance location
srp68 srp68 coding downstream 268694 8971674 ~ 8995633 (-)
evpla evpl,LOC107742557 coding downstream 296947 8955256 ~ 8967380 (-)
acox1 acox1 coding downstream 313154 8933083 ~ 8951173 (-)
LOC122347059 rhbdf2 coding downstream 331894 8886508 ~ 8932433 (-)
ube2o ube2o,LOC100331775 coding downstream 381163 8857534 ~ 8883164 (-)
nol11 nol11,LOC107567930,LOC107734779,LOC107728513,LOC107660301 coding upstream 18829 9283403 ~ 9299043 (-)
si:dkey-237i9.1 LOC107567927,LOC107667603,LOC107591922,LOC107667296,LOC107731096,LOC108272757,LOC108424802 coding upstream 44012 9308586 ~ 9352668 (-)
LOC122346819 rptor,LOC107553319 coding upstream 321851 9586425 ~ 9710598 (-)
LOC122346913 nptx1,LOC107750979,LOC107553322,LOC107667295,LOC107701212 coding upstream 513676 9778250 ~ 9781983 (-)
trim25 trim25,LOC107710025,LOC107553309,LOC107669536 coding upstream 774853 10039427 ~ 10048868 (-)
G43892 NA non-coding downstream 1718 9262403 ~ 9262609 (-)
G43884 NA non-coding downstream 8318 9255726 ~ 9256009 (-)
G43880 NA non-coding downstream 11259 9251986 ~ 9253068 (-)
G43881 NA non-coding downstream 12648 9250699 ~ 9251679 (-)
G43856 NA non-coding downstream 238898 9025208 ~ 9025429 (-)
G43906 NA non-coding upstream 11066 9275640 ~ 9276072 (-)
G43915 NA non-coding upstream 16357 9280931 ~ 9281402 (-)
G43916 NA non-coding upstream 16941 9281515 ~ 9282468 (-)
G43991 NA non-coding upstream 120535 9385109 ~ 9729660 (-)
G44010 NA non-coding upstream 315122 9579696 ~ 9915583 (-)
G43890 NA other downstream 3082 9260616 ~ 9261245 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other downstream 550469 8708706 ~ 8713858 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other downstream 1216319 8047102 ~ 8048008 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other downstream 1493876 7737090 ~ 7770451 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other downstream 1677960 7579895 ~ 7586367 (-)
G43896 NA other upstream 1428 9266002 ~ 9267324 (-)
G43899 NA other upstream 4614 9269188 ~ 9270922 (-)
G43900 NA other upstream 6844 9271418 ~ 9272305 (-)
anapc11 anapc11,LOC107553313 other upstream 681093 9945667 ~ 9948988 (-)
c6h17orf67 cunh17orf67,LOC107591943,LOC107669532,LOC107701203,LOC103044666 other upstream 760879 10025453 ~ 10027680 (-)

Expression


Co-expression Network