G43916


Basic Information

Item Value
gene id G43916
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9281515 ~ 9282468 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65049
ccaaaacagcctggttacaaacttttttctaaatatctttgtgttcagtacaaagaaattcatacgggtttggaatgactgtgtgagtaaatgatgacagaattataatttttgggtgaactattcatttgaGTGCATGCATTGCAACCCTTATACCTCACATTAGCAGCTCAGATCATCTGACTTTTTGTTGAAACATGCCTACAGAAGTGAGACATGTAGTCAAGCATGTTAAAGTTAGGCCATGAGGTAATTCCATCTTTACAGTTCTGCCttgaatttacattattaaGCATTTTTCAAGGAGGCAGCAACATCCAGTGattgaaatatttgttaataaatccCAACACAGGCCCTCTATATTCCTCTAATTGATACAATGATGTGACGGATGGTGTATACGGCATGGATTTTGGATTGCAACAGTCTACAAGCCTACTATACAAGTGACTGACAATGACCCTTCCCTATCAGATAACTTTTTCTTTCAATCGCACTCCCTTTCTCCAACCAGGCATTCCAGCTGACATCagacaaaatgtttatgaacATCAAGCCACGGAAGGCTGCTGGTCCATATATTCCATGTTGTGTGCTGAAGGAATGTGCAGAACAGTTAGAGAATATCTTTATggatatatgtataataataataataatgcaatttatttaatggTGCCTTTCAAAACACCAAATGTCACCTCATAAGCAGacaatgataaaaaatgtttaaaaaaaaaacgcagcaTTAGACAACAACCCTCAATACACACAggtaaaaagtactttttaatgtgttaaaaagtctttttaatgtgttaaaatgttttacaacgAAATCACTGATTGTGACACAGGTAATCACTGTTGGGAAGGTAATTCCATAGGTGAGAGGCAGCATAACTAAAGAGTCAGAAACCCAAAGTAGGTACTGCaagaaaaattgaaaat

Function

GO:

id name namespace
GO:0003774 motor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65049 True 954 lncRNA 0.36 1 9281515 9282468

Neighbor

gene id symbol gene type direction distance location
srp68 srp68 coding downstream 285882 8971674 ~ 8995633 (-)
evpla evpl,LOC107742557 coding downstream 314135 8955256 ~ 8967380 (-)
acox1 acox1 coding downstream 330342 8933083 ~ 8951173 (-)
LOC122347059 rhbdf2 coding downstream 349082 8886508 ~ 8932433 (-)
ube2o ube2o,LOC100331775 coding downstream 398351 8857534 ~ 8883164 (-)
nol11 nol11,LOC107567930,LOC107734779,LOC107728513,LOC107660301 coding upstream 935 9283403 ~ 9299043 (-)
si:dkey-237i9.1 LOC107567927,LOC107667603,LOC107591922,LOC107667296,LOC107731096,LOC108272757,LOC108424802 coding upstream 26118 9308586 ~ 9352668 (-)
LOC122346819 rptor,LOC107553319 coding upstream 303957 9586425 ~ 9710598 (-)
LOC122346913 nptx1,LOC107750979,LOC107553322,LOC107667295,LOC107701212 coding upstream 495782 9778250 ~ 9781983 (-)
trim25 trim25,LOC107710025,LOC107553309,LOC107669536 coding upstream 756959 10039427 ~ 10048868 (-)
G43915 NA non-coding downstream 113 9280931 ~ 9281402 (-)
G43906 NA non-coding downstream 5443 9275640 ~ 9276072 (-)
G43894 NA non-coding downstream 16941 9264327 ~ 9264574 (-)
G43892 NA non-coding downstream 18906 9262403 ~ 9262609 (-)
G43884 NA non-coding downstream 25506 9255726 ~ 9256009 (-)
G43991 NA non-coding upstream 102641 9385109 ~ 9729660 (-)
G44010 NA non-coding upstream 297228 9579696 ~ 9915583 (-)
G44031 rptor,LOC107553319 non-coding upstream 609763 9892231 ~ 9898950 (-)
G44014 NA non-coding upstream 640757 9923225 ~ 9926256 (-)
G44015 NA non-coding upstream 644763 9927231 ~ 9928405 (-)
G43900 NA other downstream 9210 9271418 ~ 9272305 (-)
G43899 NA other downstream 10593 9269188 ~ 9270922 (-)
G43896 NA other downstream 14191 9266002 ~ 9267324 (-)
G43890 NA other downstream 20270 9260616 ~ 9261245 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other downstream 567657 8708706 ~ 8713858 (-)
anapc11 anapc11,LOC107553313 other upstream 663199 9945667 ~ 9948988 (-)
c6h17orf67 cunh17orf67,LOC107591943,LOC107669532,LOC107701203,LOC103044666 other upstream 742985 10025453 ~ 10027680 (-)
cd7al LOC107710016,LOC107553302,LOC107669545,LOC107698686,LOC107710292,LOC107591915,LOC107553301,LOC107710015 other upstream 856437 10138905 ~ 10145168 (-)
tnrc6c2 LOC107701838,LOC107566423,LOC107754870,LOC107591908,LOC107718711,LOC107698681 other upstream 922149 10204617 ~ 10243425 (-)
LOC122347367 NA other upstream 1073409 10355877 ~ 10358850 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000034_01498024_01498299 NA coding CI01000034 null 1497080 ~ 1499836 (-)