G43943


Basic Information

Item Value
gene id G43943
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9488057 ~ 9826369 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65092
GTCACGCATTACAGGGTTAGTAGAAACAACTCAATATATCAATATTcctttgaaaacataaaaatagataaaactgTTCATTGTTCAACTGTTCATTGTTAACTTCATAacctaaataatatatttattatccatttattttttaaaatgctttaatttgatttaatttaggtctaggttttgctttatttttttttctttcatgtatGGTTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65092 True 215 lncRNA 0.24 2 9488057 9826369

Neighbor

gene id symbol gene type direction distance location
LOC122346991 cep95 coding upstream 419396 9035026 ~ 9068661 (+)
polg2 polg2 coding upstream 477148 9002581 ~ 9010909 (+)
ten1 ten1 coding upstream 532803 8951326 ~ 8955254 (+)
aanat1 aanat,aanat1,LOC107742556 coding upstream 601676 8884440 ~ 8886381 (+)
cygb2 cygb,cygb2,LOC107698994 coding upstream 884256 8564382 ~ 8603801 (+)
p4hb p4hb,LOC107553316,LOC107591928,LOC107701207 coding downstream 104401 9930770 ~ 9940743 (+)
ppp1r27b ppp1r27,LOC107710012,LOC107591937,LOC107553297 coding downstream 114537 9940906 ~ 9943224 (+)
ccdc40 ccdc40,LOC107710029,LOC107669524 coding downstream 123482 9949851 ~ 9958610 (+)
card14 card14,LOC107710011,LOC107669523,LOC107553296 coding downstream 133999 9960368 ~ 9973522 (+)
LOC122347046 cbx4,LOC107710010,LOC107669529,LOC107553295 coding downstream 187520 10013889 ~ 10018092 (+)
G43938 NA non-coding upstream 60160 9422181 ~ 9427897 (+)
G43918 NA non-coding upstream 181891 9305885 ~ 9306166 (+)
G43905 NA non-coding upstream 212058 9275740 ~ 9275999 (+)
G43904 NA non-coding upstream 212421 9275175 ~ 9275636 (+)
G43902 NA non-coding upstream 214515 9273304 ~ 9273542 (+)
G43982 LOC107553309,LOC107669536,LOC107710025 non-coding downstream 221690 10048059 ~ 10054261 (+)
G44089 NA non-coding downstream 252633 10079002 ~ 10079437 (+)
LOC122346827 NA non-coding downstream 270561 10096930 ~ 10101815 (+)
G44120 NA non-coding downstream 343723 10170092 ~ 10175131 (+)
G44129 NA non-coding downstream 378263 10204632 ~ 10210377 (+)
LOC122346821 endov other upstream 57402 9362142 ~ 9430655 (+)
G43889 NA other upstream 226195 9260633 ~ 9261862 (+)
G43879 NA other upstream 234317 9253149 ~ 9253740 (+)
G43745 NA other upstream 750656 8590104 ~ 8737401 (+)
lhfpl4a lhfpl4a,lhfpl4,LOC107716887,LOC107656118,LOC107586345,LOC107710167 other upstream 1145911 8315037 ~ 8342146 (+)
pecam1b NA other downstream 89681 9916050 ~ 9926257 (+)
LOC122346828 mcrip1,LOC107710264,LOC107553315,LOC107710031,LOC107591941,LOC108424716 other downstream 118149 9944518 ~ 9947929 (+)
dgke dgke,LOC107669536,LOC107710025,LOC107710026,LOC107669537,LOC107553311,LOC107591925,LOC107701198 other downstream 153496 9979865 ~ 10040364 (+)
atad5b LOC107578257,LOC107710017,LOC107669538 other downstream 290248 10116617 ~ 10123525 (+)
LOC122347096 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 other downstream 1044009 10870378 ~ 10882899 (+)

Expression


Co-expression Network