G44040


Basic Information

Item Value
gene id G44040
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9942615 ~ 9943218 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65219
tttttaagtatatttgggtagaaaaacattaaatccaTACATGTATAAAATTAAGACTTTCTGtacaatttcatgttttatatgtaaatgcataatacaaaaaaaaaaaaaaatcacatacaaGGCTACAGTGAGCTATTTATCAAACATTACTATAGTGCAATGATCTGCTActtaaaaaatcatgttttaaaatagaaagtgtTTAGAAAATAGAAAGCTGTAACAAACTGACAGAAAAGCTGTAGTGACTGTCATTAACACTGCATCATCTGCACTGGAACAGTTTCTTCTTGTGGAGGCAAGTGCAGCTCACATCCAAATCGTCGTCATTGGTCCAAATGCACAGGACCGCTCTATTATAACCAGACACTCTGTCCACATGCCTCAGCTACCGGCTCCACTGCATACACAGTGGATGTTCCACTCTTACCGGTTTCATCCTTTTAACTGCCATACCATAAGAGAGCAATCAGAACTTTAACACCAGGCAGGTTCAGGCACCACCAACCCCAAAGAGTTTGAGTAAGGTTTTGCAGTCTGGGTCAATAAGGTCAGCAGGCTTCTCCCCACAGTCGTTTTCAGCCTCAGTGTCTGCACCCAA
>TU65220
tagaaaaacattaaatccaTACATGTATAAAATTAAGACTTTCTGtacaatttcatgttttatatgtaaatgcataatacaaaaaaaaaaaaaaatcacatacaaGGCTACAGTGAGCTATTTATCAAACATTACTATAGTGCAATGATCTGCTActtaaaaaatcatgttttaaaatagaaagtgtTTAGAAAATAGAAAGCTGTAACAAACTGACAGAAAAGCTGTAGTGACTGTCATTAACACTGCATCATCTGCACTGGAACAGTTTCTTCTTGTGGAGGCAAGTGCAGCTCACATCCAAATCGTCGTCATTGGTCCAAATGCACAGGACCGCTCTATTATAACCAGACACTCTGTCCACATGCCTCAGCTACCGGCTCCACTGCATACACAGTGGATGTTCCACTCTTACCGGTTTCATCCTTTTAACTGCCATACCATAAGAGAGCAATCAGAACTTTAACACCAGGCAGGTTCAGGCACCACCAACCCCAAAGAGTTTGAGTAAGGTTTTGCAGTCTGGGTCAATAAGGTCAGCAGGCTTCTCCCCACAGTCGTTTTCAGCCTCAGTGTCTGCACCCAA

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65219 True 604 lncRNA 0.39 1 9942615 9943218
TU65220 False 586 lncRNA 0.39 1 9942615 9943200

Neighbor

gene id symbol gene type direction distance location
LOC122346913 nptx1,LOC107750979,LOC107553322,LOC107667295,LOC107701212 coding downstream 160632 9778250 ~ 9781983 (-)
LOC122346819 rptor,LOC107553319 coding downstream 232017 9586425 ~ 9710598 (-)
si:dkey-237i9.1 LOC107567927,LOC107667603,LOC107591922,LOC107667296,LOC107731096,LOC108272757,LOC108424802 coding downstream 589947 9308586 ~ 9352668 (-)
nol11 nol11,LOC107567930,LOC107734779,LOC107728513,LOC107660301 coding downstream 643572 9283403 ~ 9299043 (-)
srp68 srp68 coding downstream 946982 8971674 ~ 8995633 (-)
trim25 trim25,LOC107710025,LOC107553309,LOC107669536 coding upstream 96209 10039427 ~ 10048868 (-)
utp6 utp6,LOC107710019 coding upstream 158265 10101483 ~ 10106808 (-)
tefm tefm,LOC107591914 coding upstream 180597 10123815 ~ 10126741 (-)
znf207b znf207b,LOC107669543,LOC107710013,LOC107553300 coding upstream 203006 10146224 ~ 10152064 (-)
rhbdl3 rhbdl3,LOC107718708,LOC107701837,LOC107698683,LOC107591910,LOC107754871 coding upstream 224018 10167236 ~ 10202756 (-)
G44037 ppp1r27,LOC107710012,LOC107591937,LOC107553297 non-coding downstream 609 9941570 ~ 9942006 (-)
G44036 p4hb,LOC107728011,LOC107591928,LOC107553316,LOC107701207 non-coding downstream 2001 9930786 ~ 9940614 (-)
G44038 NA non-coding downstream 7138 9933701 ~ 9935477 (-)
G44015 NA non-coding downstream 14210 9927231 ~ 9928405 (-)
G44014 NA non-coding downstream 16359 9923225 ~ 9926256 (-)
G44065 cbx4,LOC107710010,LOC107669529,LOC107553295 non-coding upstream 70718 10013936 ~ 10018068 (-)
G44095 NA non-coding upstream 140772 10083990 ~ 10084275 (-)
G44105 NA non-coding upstream 154762 10097980 ~ 10098179 (-)
G44167 NA non-coding upstream 295201 10238419 ~ 10238618 (-)
G44168 NA non-coding upstream 298992 10242210 ~ 10242509 (-)
G43900 NA other downstream 670310 9271418 ~ 9272305 (-)
G43899 NA other downstream 671693 9269188 ~ 9270922 (-)
G43896 NA other downstream 675291 9266002 ~ 9267324 (-)
G43890 NA other downstream 681370 9260616 ~ 9261245 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other downstream 1228757 8708706 ~ 8713858 (-)
anapc11 anapc11,LOC107553313 other upstream 2449 9945667 ~ 9948988 (-)
c6h17orf67 cunh17orf67,LOC107591943,LOC107669532,LOC107701203,LOC103044666 other upstream 82235 10025453 ~ 10027680 (-)
cd7al LOC107710016,LOC107553302,LOC107669545,LOC107698686,LOC107710292,LOC107591915,LOC107553301,LOC107710015 other upstream 195687 10138905 ~ 10145168 (-)
tnrc6c2 LOC107701838,LOC107566423,LOC107754870,LOC107591908,LOC107718711,LOC107698681 other upstream 261399 10204617 ~ 10243425 (-)
LOC122347367 NA other upstream 412659 10355877 ~ 10358850 (-)

Expression


Co-expression Network