G44135 (LOC107698681,LOC107591908,LOC107754870,LOC107566423,LOC107718711,LOC107701838)


Basic Information

Item Value
gene id G44135
gene name LOC107698681,LOC107591908,LOC107754870,LOC107566423,LOC107718711,LOC107701838
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10228314 ~ 10228626 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65365
GCCGTTTGCTGGTGGGCGTCTCGGGAGGGGAGATGACCCCGGACTGAGTGCAAGCAGAGGTCGGGTTCAGAGCGCCTGTAGGTAAAGGTTGACCCCTCTTCAGTAACTGCCTCTGCTCCTGCTGTCGGAAGCGTGGAGGAACCTCTCTGGGCACATATCGGGGACTAGGCTGCTGTAATGGAGGTAACTGCTGTTGAAGGGAATTACAAGGGCTACGCTTGCCATTGCTGGTGGTAGCAGCAGAAGGTACAGGCAGGTTCAGGGTCAGAATGGGGCTTGATGGGATGCTGGGATTGGGTTTATCAGAGTCTGG

Function

NR:

description
PREDICTED: trinucleotide repeat-containing gene 6C protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65365 True 313 lncRNA 0.57 1 10228314 10228626

Neighbor

gene id symbol gene type direction distance location
rhot1b rhot1b,LOC107669542,LOC107710015,LOC107553301,LOC105892309,LOC103373013 coding upstream 86707 10130646 ~ 10141607 (+)
LOC122346392 NA coding upstream 97771 10126776 ~ 10130543 (+)
suz12b suz12,LOC107710018,LOC107553303,LOC107669539,LOC107591916 coding upstream 112033 10107180 ~ 10116281 (+)
rab11fip4b rab11fip4,LOC107710022,LOC107553307 coding upstream 154786 10056898 ~ 10073528 (+)
cbx8b cbx8,cbx8b,LOC107710282,LOC107710028,LOC107553294,LOC107591932,LOC107669528 coding upstream 203432 10022614 ~ 10024882 (+)
mchr1a mchr1a,LOC107704000,LOC107728182,LOC107733891,LOC107561025,LOC107659856 coding downstream 198965 10427591 ~ 10430538 (+)
stx8 stx8,LOC107704006,LOC107555374,LOC107733906,LOC107569362,LOC107660464,LOC107757428 coding downstream 295354 10523980 ~ 10578805 (+)
LOC122347357 LOC107733903,LOC107704004,LOC107555376,LOC107569359 coding downstream 609822 10838448 ~ 10858010 (+)
glulb glulb,LOC107555380,LOC107733907,LOC107704001,LOC107757425,LOC107660462,LOC107569358,LOC102795441,LOC105019150 coding downstream 672380 10901006 ~ 10904025 (+)
znf648 LOC107678353,LOC107555382,LOC107733900,LOC107719322,LOC107660466,LOC107564440 coding downstream 694042 10922668 ~ 10930433 (+)
G44129 NA non-coding upstream 17937 10204632 ~ 10210377 (+)
G44120 NA non-coding upstream 53183 10170092 ~ 10175131 (+)
LOC122346827 NA non-coding upstream 126499 10096930 ~ 10101815 (+)
G44089 NA non-coding upstream 148877 10079002 ~ 10079437 (+)
G43982 LOC107553309,LOC107669536,LOC107710025 non-coding upstream 174053 10048059 ~ 10054261 (+)
G44137 NA non-coding downstream 14154 10242780 ~ 10243410 (+)
G44189 NA non-coding downstream 129966 10358592 ~ 10358799 (+)
G44190 NA non-coding downstream 142900 10371526 ~ 10371933 (+)
G44199 NA non-coding downstream 179905 10408531 ~ 10408770 (+)
G44215 NA non-coding downstream 182951 10411577 ~ 10413980 (+)
atad5b LOC107578257,LOC107710017,LOC107669538 other upstream 104789 10116617 ~ 10123525 (+)
dgke dgke,LOC107669536,LOC107710025,LOC107710026,LOC107669537,LOC107553311,LOC107591925,LOC107701198 other upstream 187950 9979865 ~ 10040364 (+)
LOC122346828 mcrip1,LOC107710264,LOC107553315,LOC107710031,LOC107591941,LOC108424716 other upstream 280385 9944518 ~ 9947929 (+)
pecam1b NA other upstream 302057 9916050 ~ 9926257 (+)
G43962 rptor,LOC107728013,LOC107700860,LOC107553319 other upstream 416739 9786840 ~ 9811575 (+)
LOC122347096 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 other downstream 641752 10870378 ~ 10882899 (+)
pik3r6a zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC105903457 other downstream 654334 10882960 ~ 10892460 (+)
G44478 LOC107749977,LOC107730703,LOC107675437,LOC107564626,LOC107698886,LOC107555394 other downstream 1186647 11415273 ~ 11420330 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other downstream 1773521 12002147 ~ 12010539 (+)
G44588 NA other downstream 1858773 12087399 ~ 12092455 (+)

Expression


Co-expression Network