LOC122347367


Basic Information

Item Value
gene id LOC122347367
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10355877 ~ 10358850 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65477
CAAATTTCACTCATCTAATCATAATTTCGGCAattaaagcctttttgtttcattgcaaactttaaactaaaaatagcaAATGGTATTTAACTCTCtgaggttttttgttttaaacttggTTCCATTCTTAACCAATCCTGTTCCTTTGCAGTTACGGGCATGTTCTCTTCTTTTCTGTAACTTTTCAGAATGCATCAAAACAAGCCACTGTTTTTGTGTTGACTAACAATGTCGAATGTCAAGTTTTAAAGCTTATGCAGATGAGgcttttatatatcatttaacaTGCATGCTGTTTTAC
>XM_043242568.1
CACAAGGTAATTATAGTCACGAAGAGCTTTGAAGATGCCGTGTGTCGTGAGGTACAGTTCTCTACTGATCAgtatctgtttaaaaaacatcttGTGTGCAGAACAAAACTTACCAGcTGAATCTATGACAGTAGCTGTTGGAAATGAAGTCATTATCCAGTGTGCTACTGATAAAACCCCTCTAGATGGGGTCTACATGTACAAAAAAggatcaaatgaaaacaaacacctCGTCTTCTACTATTACAAAGACGgcacatttaacattaaagaAGCAAAGTATAAAGATAGATTCAGAGTGATCGGAATATTTCCCAAGCTTTTAGCTTACTTCTCAAATGTAACTACCTCAGACATTGGGGTGTACTGGTgtgaatttaattttgatgagaATATTACTTTGGGCAAAGTCACAGGGCTGTTCATAAAGATTATGGACAGCAGGGATAACAAATTGCAGACAAATATGAATGACACAAAAGCAGTAAATATAACAGAATCACAAAATAACTGCACGGAAAATATTCATGTGAAGATCGTTCTCGCTGTATGTGCTGTCCTGTCGCTACTGTGTGTCATTGGCTTCATCTTTGTGATTGTGAAGGTGAAGGGCCGTTgggggaataaaaaaaacaggcctTCAAATGAACCCCCAGACTCAGTTTATGAAGAGATGAAACGGAGCAATTTCGACATCCAGCCGAGTGTACGGATGCTCATCAACCATGGCTATCAAACCACCAAGCtattttgctaaatatcttTGATATTAGATTTTAAGTTGTATCATTTTCTATTTGGATTGGCAGCTGAATGATTAATTGCTTTGAATTTGAgtttatcatttgcattttttgagttcagagagagagaaatacaatTCTATAATTAATTTAGTGTGAATATCATGGTTATATTTTAAGCTGTAGGTCAAgaagaatttaaaatagtttcagtgtgaggaacaaacaaaatatgcagCAGAGATATTGTTAGCTGATGGACAGATGAAATGTCTAATACCTCATTTGTGGTCTGATGAGCTCATGCATGTGCAAAGAGCTCAAGGAGGAATAGCAGGTAATCAAATTTCACTCATCTAATCATAATTTCGGCAattaaagcctttttgtttcattgcaaactttaaactaaaaatagcaAATGGTATTTAACTCTCtgaggttttttgttttaaacttggTTCCATTCTTAACCAATCCTGTTCCTTTGCAGTTACGGGCATGTTCTCTTCTTTTCTGTAACTTTTCAGAATGCATCAAAACAAGCCACTGTTTTTGTGTTGACTAACAATGTCGAATGTCAAGTTTTAAAGCTTATGCAGATGAGgcttttatatatcatttaacaTGCATGCTGTTTTACTCACCACCCAGCTGcatatgtattacattttaatgtttttaatttaattctacaGTTTTTTCTTGTGTTTGAAAAAAGTGTCTCATGTCTCTGTACTGTGCCACATAATGTAAACACTgtataatgcaaaaacaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65477 False 301 lncRNA 0.32 1 10356014 10356314
XM_043242568.1 True 1523 mRNA 0.35 4 10355877 10358850

Neighbor

gene id symbol gene type direction distance location
sept9b sept9b,LOC107754867,LOC107566422,LOC107561033,LOC107718712,LOC107674495 coding downstream 20836 10296004 ~ 10335041 (-)
rhbdl3 rhbdl3,LOC107718708,LOC107701837,LOC107698683,LOC107591910,LOC107754871 coding downstream 153121 10167236 ~ 10202756 (-)
znf207b znf207b,LOC107669543,LOC107710013,LOC107553300 coding downstream 203813 10146224 ~ 10152064 (-)
tefm tefm,LOC107591914 coding downstream 229136 10123815 ~ 10126741 (-)
utp6 utp6,LOC107710019 coding downstream 249069 10101483 ~ 10106808 (-)
zgc:174863 NA coding upstream 18481 10377331 ~ 10384083 (-)
jpt1a LOC107728178,LOC107659861,LOC107733897,LOC107561029,LOC107573532 coding upstream 31197 10390047 ~ 10394216 (-)
sumo2a LOC107573531,LOC107733894,LOC107704011,LOC106574529 coding upstream 36323 10395173 ~ 10398631 (-)
gga3a gga3,LOC107704010,LOC107573533,LOC107733910,LOC107659859 coding upstream 40495 10399345 ~ 10406457 (-)
mif4gda mif4gda,LOC107728181,LOC107561027,LOC107659858 coding upstream 50058 10408908 ~ 10411264 (-)
G44168 NA non-coding downstream 113368 10242210 ~ 10242509 (-)
G44167 NA non-coding downstream 117259 10238419 ~ 10238618 (-)
G44105 NA non-coding downstream 257698 10097980 ~ 10098179 (-)
G44095 NA non-coding downstream 271602 10083990 ~ 10084275 (-)
G44065 cbx4,LOC107710010,LOC107669529,LOC107553295 non-coding downstream 337809 10013936 ~ 10018068 (-)
G44208 NA non-coding upstream 13790 10372640 ~ 10372852 (-)
G44209 NA non-coding upstream 14320 10373170 ~ 10373568 (-)
G44210 NA non-coding upstream 17290 10376140 ~ 10376578 (-)
G44213 NA non-coding upstream 29194 10388044 ~ 10388442 (-)
G44338 NA non-coding upstream 222559 10581409 ~ 10582029 (-)
tnrc6c2 LOC107701838,LOC107566423,LOC107754870,LOC107591908,LOC107718711,LOC107698681 other downstream 112452 10204617 ~ 10243425 (-)
cd7al LOC107710016,LOC107553302,LOC107669545,LOC107698686,LOC107710292,LOC107591915,LOC107553301,LOC107710015 other downstream 210709 10138905 ~ 10145168 (-)
c6h17orf67 cunh17orf67,LOC107591943,LOC107669532,LOC107701203,LOC103044666 other downstream 328197 10025453 ~ 10027680 (-)
anapc11 anapc11,LOC107553313 other downstream 406889 9945667 ~ 9948988 (-)
G43900 NA other downstream 1083572 9271418 ~ 9272305 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other upstream 75354 10434204 ~ 10509003 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other upstream 220139 10578989 ~ 10835525 (-)
G44358 zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC107660467 other upstream 351195 10710045 ~ 10716741 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other upstream 589842 10948692 ~ 10985132 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other upstream 696185 11055035 ~ 11069466 (-)

Expression


Co-expression Network