pik3r6a (zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC105903457)


Basic Information

Item Value
gene id pik3r6a
gene name zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC105903457
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10882960 ~ 10892460 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65550
AGCATTAGCGAATTTGTGTAATCAGTGCAGAGTACTATATCATCCATGCTAATAAATAgcgaaaaataaatgtttttggtcCAGCTGGTGTTAAAGACGTGTGTAGGTCCATTTCCTGCCAGTTCTCAAAGGCTGGAATGGAAGTCATGTAATGTATTGCAGAATTCTTTTGTAAAACCAGCAAAATaccacaaacaaataaataattgaattgcATGATACACGAATGCATGTATTTTCAGATTGCATTTCCCAGAAATAATAGGAAAACCTTGAGCTAAATGAAGGACGTAAAAAAGCTTTCATGAATAGCAGATTATACAGACAGTCTTCTCATAATGCATTGCCTCATAATCACCAGTTATTTCTGCTATACAGGGAACGGGAGGAGGACAAAGAGATGGCTGAATTTCTTAAGTCCAAACTACCAAAAAGCTCTCAAAGCAAGAGTGTTGCTCGCAGTGGAAGGAGGCCGCCCAGAGCCCAGCAGACTGCTCCCTTTGTAACCAAGACAGGCCTCACTTTGCTGAAGGAGTGCTGTGGATTCACCTGCTCTATAATGTAAAAGACACTCAGTGTCTCGGCAGAGGCAGCATGAACACAGTGCATTTTTGGAGCCTTGGATAAGGATGACCTTTTAACGACACCAGGAGACTCAAAGGATACGATGTGAACCATCAGAGATTTCTAAAAGACAAAGCTGTGACGTTGTCTATTAAAGGAATAGCAGTTgcgtatatatattttttttagatatattttttgtccGCACCCATTTGCTCGCTTTCTACCTAACTCtaattttttctttgaaaaatccTGTTTCGTTGCATTACAGAGAACATTTTGTGTCCTCTCAAGGGTCCTGCTGTCAGCAGCTCAGCTAGTTTGCTGTC
>XM_043242125.1
acaaaaaaaaagtttgttgttgttggtaaTGATGATGACCAGAAGATGTCGTGAATGAGTCAGGAATAGAAGAGAAAGCGCTGCCGCTGCGTGATGAAGTCTAGTTCCCCTCAGCCGTCGAGAACCGCTGGGTCCGCTGCATTGTTTGAGTGAGCCCTCTTGCTTTTGCCTGTCTAAAAGTCGGGGTGTTCGTATAAGCTCAGGCTTTCGCTGGAGTGTGATGGATGAAAAGCGCAGAGCGTCCTGTCAGTATGGATCCCTGGAATGCACGAAATGGAAAACAGACGTGGACCAAACAGAGGCAGATGTGGTCTCAATGGCCGACTCTACTATCACAGTTGGAGACATAGAGGGGGAACTCTGTAAGATTGAACGGATCAGAGACATTTTGATCAAGGAATCTGAGCTAAGATACATgaTGGATGATATCCAGTTATGTAAAGAAATTACAAGACTGAAAAAAGAGCTTCAAAAGCTTTTGTCTATCCCAGATAATGACAAGTCTAATGAAGACAAACAGAAGGAGGAAGAACTTCTGAAACAGATTCATAAATTAGTGGAGGCCAGAGACTTCTTAGTGGATGACGTGGAGTTTGAGCGTCTCAGGGAACGGGAGGAGGACAAAGAGATGGCTGAATTTCTTAAGTCCAAACTACCAAAAAGCTCTCAAAGCAAGAGTGTTGCTCGCAGTGGAAGGAGGCCGCCCAGAGCCCAGCAGACTGCTCCCTTTGTAACCAAGACAGGCCTCACTTTGCTGAAGGAGTGCTGTGGATTCACCTGCTCTATAATGTAAAAGACACTCAGTGTCTCGGCAGAGGCAGCATGAACACAGTGCATTTTTGGAGCCTTGGATAAGGATGACCTTTTAACGACACCAGGAGACTCAAAGGATACGATGTGAACCATCAGAGATTTCTAAAAGACAAAGCTGTGACGTTGTCTATTAAAGGAATAGCAGTTgcgtatatatattttttttagatatattttttgtccGCACCCATTTGCTCGCTTTCTACCTAACTCtaattttttctttgaaaaatccTGTTTCGTTGCATTACAGAGAACATTTTGTGTCCTCTCAAGGGTCCTGCTGTCAGCAGCTCAGCTAGTTTGCTGTCATTCCCTACCCTTATCTTTTCCCTCGTGAGACATTGCTACGGCAGTGCAGTACCTGTGACTTCATCATCCATAAATGCTCAAGTTTCAGTAGAGGTTTCATTTAGACTGCCGTTTCTTAGCCAAgccaggctcattggaaatatgtGCCTGTggctacatttctgcaaaataacATTATGTTGCTTGCATTCTTATACAACACACTGAAAGTCAAATGTTCCAGTGAATGGCGCTAACTGCATGTTCACTTTTATTCTAAACAGATGAACAATGCTCGTT

Function

NR:

description
PREDICTED: uncharacterized protein C16orf45-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65550 False 896 lncRNA 0.40 2 10889379 10892180
XM_043242125.1 True 1404 mRNA 0.44 7 10882960 10892460

Neighbor

gene id symbol gene type direction distance location
LOC122347357 LOC107733903,LOC107704004,LOC107555376,LOC107569359 coding upstream 24950 10838448 ~ 10858010 (+)
stx8 stx8,LOC107704006,LOC107555374,LOC107733906,LOC107569362,LOC107660464,LOC107757428 coding upstream 304155 10523980 ~ 10578805 (+)
mchr1a mchr1a,LOC107704000,LOC107728182,LOC107733891,LOC107561025,LOC107659856 coding upstream 452422 10427591 ~ 10430538 (+)
rhot1b rhot1b,LOC107669542,LOC107710015,LOC107553301,LOC105892309,LOC103373013 coding upstream 741353 10130646 ~ 10141607 (+)
LOC122346392 NA coding upstream 752417 10126776 ~ 10130543 (+)
glulb glulb,LOC107555380,LOC107733907,LOC107704001,LOC107757425,LOC107660462,LOC107569358,LOC102795441,LOC105019150 coding downstream 8546 10901006 ~ 10904025 (+)
znf648 LOC107678353,LOC107555382,LOC107733900,LOC107719322,LOC107660466,LOC107564440 coding downstream 30208 10922668 ~ 10930433 (+)
gadd45ab gadd45ab,gadd45a,LOC107555372,LOC107678351,LOC107670797,LOC108272203 coding downstream 51292 10943752 ~ 10946264 (+)
tgfbr3 tgfbr3,LOC107749982,LOC107555391,LOC107564431,LOC107675425,LOC107678350,LOC107730687 coding downstream 180715 11073175 ~ 11162716 (+)
znf644b znf644b,LOC107749981,LOC107555369,LOC107675435,LOC107730700,LOC107564430 coding downstream 287368 11179828 ~ 11200924 (+)
LOC122346901 NA non-coding upstream 219271 10662120 ~ 10663689 (+)
G44252 ntn1a non-coding upstream 282896 10599748 ~ 10600064 (+)
G44248 NA non-coding upstream 299279 10582349 ~ 10583681 (+)
G44245 NA non-coding upstream 328365 10521974 ~ 10554595 (+)
G44246 LOC107733892,LOC107555367,LOC107703995 non-coding upstream 359738 10516890 ~ 10523222 (+)
G44297 NA non-coding downstream 98910 10991370 ~ 10991602 (+)
G44298 NA non-coding downstream 103948 10996408 ~ 10997516 (+)
G44301 LOC107577034,LOC107675434,LOC107564434,LOC107730699,LOC107678357,LOC107733908 non-coding downstream 108231 11000691 ~ 11001355 (+)
G44440 NA non-coding downstream 323587 11216047 ~ 11216274 (+)
G44443 NA non-coding downstream 329169 11221629 ~ 11222047 (+)
LOC122347096 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 other upstream 61 10870378 ~ 10882899 (+)
atad5b LOC107578257,LOC107710017,LOC107669538 other upstream 759435 10116617 ~ 10123525 (+)
dgke dgke,LOC107669536,LOC107710025,LOC107710026,LOC107669537,LOC107553311,LOC107591925,LOC107701198 other upstream 842596 9979865 ~ 10040364 (+)
LOC122346828 mcrip1,LOC107710264,LOC107553315,LOC107710031,LOC107591941,LOC108424716 other upstream 935031 9944518 ~ 9947929 (+)
pecam1b NA other upstream 956703 9916050 ~ 9926257 (+)
G44478 LOC107749977,LOC107730703,LOC107675437,LOC107564626,LOC107698886,LOC107555394 other downstream 522813 11415273 ~ 11420330 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other downstream 1109687 12002147 ~ 12010539 (+)
G44588 NA other downstream 1194939 12087399 ~ 12092455 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other downstream 1261808 12154268 ~ 12159899 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other downstream 1629313 12521773 ~ 12526957 (+)

Expression


Co-expression Network