G44297


Basic Information

Item Value
gene id G44297
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10991370 ~ 10991602 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65596
GTCCCATCCTGTTCCTGGAGGCCTACCATAAAGCAGAGTTTAGCCTAAATattccttttattttgaagagatGCCCACCTCTACATCTCTCTACCACTGGCCAAAGTGTAATGGTCAACTTAGATCATTATTATCACAAGGGTCTCCAACCCTACTCCTAGCAAGCTACCATCCTGTAGAGTTCCTGCAGGTACGCGTTTCCCAACTATTGTTGTATCCCAACTGTTGTCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65596 True 233 lncRNA 0.45 1 10991370 10991602

Neighbor

gene id symbol gene type direction distance location
gadd45ab gadd45ab,gadd45a,LOC107555372,LOC107678351,LOC107670797,LOC108272203 coding upstream 45106 10943752 ~ 10946264 (+)
znf648 LOC107678353,LOC107555382,LOC107733900,LOC107719322,LOC107660466,LOC107564440 coding upstream 60937 10922668 ~ 10930433 (+)
glulb glulb,LOC107555380,LOC107733907,LOC107704001,LOC107757425,LOC107660462,LOC107569358,LOC102795441,LOC105019150 coding upstream 87345 10901006 ~ 10904025 (+)
LOC122347357 LOC107733903,LOC107704004,LOC107555376,LOC107569359 coding upstream 133360 10838448 ~ 10858010 (+)
stx8 stx8,LOC107704006,LOC107555374,LOC107733906,LOC107569362,LOC107660464,LOC107757428 coding upstream 412565 10523980 ~ 10578805 (+)
tgfbr3 tgfbr3,LOC107749982,LOC107555391,LOC107564431,LOC107675425,LOC107678350,LOC107730687 coding downstream 81573 11073175 ~ 11162716 (+)
znf644b znf644b,LOC107749981,LOC107555369,LOC107675435,LOC107730700,LOC107564430 coding downstream 188226 11179828 ~ 11200924 (+)
barhl2 barhl2,LOC107675428,LOC107678352,LOC107555373,LOC107564632 coding downstream 263007 11254609 ~ 11258567 (+)
LOC122346915 kyat3,ccbl2,si:ch73-97h19.2,LOC107698888,LOC100332215 coding downstream 450509 11442111 ~ 11447927 (+)
dzip1l LOC107679858,LOC107756183,LOC107593178,LOC107751311,LOC107577891 coding downstream 800068 11791670 ~ 11801796 (+)
LOC122346901 NA non-coding upstream 327681 10662120 ~ 10663689 (+)
G44252 ntn1a non-coding upstream 391306 10599748 ~ 10600064 (+)
G44248 NA non-coding upstream 407689 10582349 ~ 10583681 (+)
G44245 NA non-coding upstream 436775 10521974 ~ 10554595 (+)
G44246 LOC107733892,LOC107555367,LOC107703995 non-coding upstream 468148 10516890 ~ 10523222 (+)
G44298 NA non-coding downstream 4806 10996408 ~ 10997516 (+)
G44301 LOC107577034,LOC107675434,LOC107564434,LOC107730699,LOC107678357,LOC107733908 non-coding downstream 9089 11000691 ~ 11001355 (+)
G44440 NA non-coding downstream 224445 11216047 ~ 11216274 (+)
G44443 NA non-coding downstream 230027 11221629 ~ 11222047 (+)
G44453 NA non-coding downstream 246613 11238215 ~ 11238423 (+)
pik3r6a zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC105903457 other upstream 98910 10882960 ~ 10892460 (+)
LOC122347096 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 other upstream 108471 10870378 ~ 10882899 (+)
atad5b LOC107578257,LOC107710017,LOC107669538 other upstream 867845 10116617 ~ 10123525 (+)
dgke dgke,LOC107669536,LOC107710025,LOC107710026,LOC107669537,LOC107553311,LOC107591925,LOC107701198 other upstream 951006 9979865 ~ 10040364 (+)
LOC122346828 mcrip1,LOC107710264,LOC107553315,LOC107710031,LOC107591941,LOC108424716 other upstream 1043441 9944518 ~ 9947929 (+)
G44478 LOC107749977,LOC107730703,LOC107675437,LOC107564626,LOC107698886,LOC107555394 other downstream 423671 11415273 ~ 11420330 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other downstream 1010545 12002147 ~ 12010539 (+)
G44588 NA other downstream 1095797 12087399 ~ 12092455 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other downstream 1162666 12154268 ~ 12159899 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other downstream 1530171 12521773 ~ 12526957 (+)

Expression


Co-expression Network