G44350


Basic Information

Item Value
gene id G44350
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10687060 ~ 10895352 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65668
GACAgtaagataaatatatatttttggagtTAAAAAATATAGAGAGACATCTAATGCTCACTAAGTCTACAGTTATTTGATAATATTGTTAATCGTAGATTTTAATCCTACTGACCCAaaacttttttatgtaaataagtaagtacatatatacacacacatacataaataaaagtacacgtatacattaatatgttaaaacatattttgttaaaatttaaaCCAGGGGTCACCACATTTGGTCCTGGAGGGTTCCTGTATCTAATCAAGGTTTTACTAGATATACTTCAAATCTGctggacaccggccctccaggatcaagATTGGTGACCCCTAATTTAAACTGGAAATGCTAAAGACTTTGCTACTATTATTCAGTGACACTGTATTAATGCCATTGGCTTATTCATCATTTATCCTAATGTATCAACGTATATTGTAATTATAGATTTAGCAAATCACATAAATACtgtatcattataaataatctGTTATGCTAGGCCTAGATGAGGTAAGGCGTATCCAAATGCTAGCAGTTTAATGCACAGAAACATGGAGCAGAAGCAAGAGCAGAAATCCAAAACGGCAgcaaaaattagaaaaaaacagggaaaaaGGCAGCAAACAGTTAACTATGAACTATAAGAGTCAAAGAACAGAGACGCAATCAGGCTTACTGATATAATCATAATCATGTTGGTAGCTGTCATGTCAATAGACTGTATAAAGACACCTGAGACAATACAGtagcttctacagacactaaacAGCTACACAAGTGCTTCACCAGTTTCACTGAAAGTAATTTGAGAGCGTAGCATAGCAAGACACGCATCCCAGTGCTGAAAATAACTCTTGAACCTGGACTACAGCTGTaaccagaataaaaaaaaaaaaaaaagagagatgagaGCGATATGAAAGAACTCATCAGAGTGTAACCTGACTGTTTTATCCTTTCATAAAGGAGACAACCTCAGGGAAACAGTTACTCTAATTGTAGCTGCAGTCTTCTATAGTCATTCACATCATACAGAAAGCCAGCTTTTATCATTT

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0032400 melanosome localization biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU65668 True 1056 lncRNA 0.34 3 10687060 10895352

Neighbor

gene id symbol gene type direction distance location
LOC122346769 LOC107733892,LOC107555367,LOC107703995 coding downstream 164364 10517118 ~ 10522696 (-)
cfap52 cfap52,LOC107757424,LOC107659863,LOC107703996 coding downstream 170096 10509922 ~ 10516964 (-)
grb2a grb2a,grb2,LOC107733915,LOC107728184,LOC107704009,LOC105012273,LOC107659857,LOC108441871 coding downstream 259650 10411701 ~ 10427410 (-)
mif4gda mif4gda,LOC107728181,LOC107561027,LOC107659858 coding downstream 275796 10408908 ~ 10411264 (-)
gga3a gga3,LOC107704010,LOC107573533,LOC107733910,LOC107659859 coding downstream 280603 10399345 ~ 10406457 (-)
sec16b sec16b coding upstream 35218 10930570 ~ 10943617 (-)
dr1 dr1,LOC107555385 coding upstream 90172 10985524 ~ 10988423 (-)
zgc:109982 LOC107678358,LOC106920129,LOC103368644,LOC103139842,LOC107733899,LOC105940069,LOC103463988 coding upstream 95623 10990975 ~ 10996060 (-)
scinla scinla,LOC107730699,LOC107675434,LOC107564434,LOC107678357,LOC107733908 coding upstream 101045 10996397 ~ 11005424 (-)
si:ch73-389b16.1 si:ch73-389b16.1 coding upstream 115646 11010998 ~ 11013344 (-)
G44341 NA non-coding downstream 33690 10646133 ~ 10653370 (-)
G44339 NA non-coding downstream 104776 10582033 ~ 10582284 (-)
G44338 NA non-coding downstream 105031 10581409 ~ 10582029 (-)
G44213 NA non-coding downstream 298618 10388044 ~ 10388442 (-)
G44210 NA non-coding downstream 310482 10376140 ~ 10376578 (-)
G44447 NA non-coding upstream 337099 11232451 ~ 11232784 (-)
G44449 NA non-coding upstream 339138 11234490 ~ 11234694 (-)
G44450 NA non-coding upstream 339523 11234875 ~ 11235096 (-)
G44452 NA non-coding upstream 342610 11237962 ~ 11238198 (-)
G44457 NA non-coding upstream 343767 11239119 ~ 11239464 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other downstream 178057 10434204 ~ 10509003 (-)
LOC122347367 NA other downstream 328210 10355877 ~ 10358850 (-)
tnrc6c2 LOC107701838,LOC107566423,LOC107754870,LOC107591908,LOC107718711,LOC107698681 other downstream 443635 10204617 ~ 10243425 (-)
cd7al LOC107710016,LOC107553302,LOC107669545,LOC107698686,LOC107710292,LOC107591915,LOC107553301,LOC107710015 other downstream 541892 10138905 ~ 10145168 (-)
c6h17orf67 cunh17orf67,LOC107591943,LOC107669532,LOC107701203,LOC103044666 other downstream 659380 10025453 ~ 10027680 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other upstream 53340 10948692 ~ 10985132 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other upstream 159683 11055035 ~ 11069466 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other upstream 1630404 12525756 ~ 12897718 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 2759908 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 2822850 13718202 ~ 13785903 (-)

Expression


Co-expression Network