gng12b (LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932)


Basic Information

Item Value
gene id gng12b
gene name LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10948692 ~ 10985132 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65676
ACCGTTCCGCCTTATTTACACGTACAGAAGTGAAAGGTCGATCGGTTTCTGAGTTCGGCTGTTTCTGATAAACGTAGACCGTTTTGCAGACCACTGAagtcaaaaataacaataagttTCTGCCGTGACGGTTGTTACAGGCGAACTTTACGTACTTGTGAAGAATTGCCATCGAAAGAACGGTCTGTTTAACCAGTAGTACGCCAAGGTTGTTCTCCTATTCCCGTTTTTTCTTCCTCCCCACCAAACCCAGCCGAGATAAGGTCTGTGAAGATAATTGAAGATGTCGTCTAAGATGCAAAGCTCTAATAATATAGCCCAGGCCAGAAGGACTGTTCAGCAGCTACGGATAGAAGCTAACATAGAGAGAATAAAGatttctAAAGCTTCTGCGGACCTCATGCATTACTGCAATGAACATGCCAAGTACGATCCTCTACTTATGGGTATCCCAGCTCCGGAAAACCCTTTTAAGGATAAAAAGCCATGCACTATATTGTAGTGGGATGCTTGAACTCTTACCGTATGTTTTGACGTtcccttttattattttttttttaatagaaagaaTACGATCTTCAAACACTCGTTCACTCTTCGCCTTAAACCCCGAGCTATTATTTGATTGTATCCGCACCAGAAAAAGGAGAGTCAAAGCTCCcagtaaacaaatcatttgtggtgcaaagacaaaaacCGACCCATGAATGAGTTTTTCTGCTttagggcacagcacagatgaGTTGTTTGCTTTGTGATAGTGTCCACTGATGTGGTCGTGTCTTCTGCAAATAAAGGGTGAGGTCAGAGTGGGCGGCTCTCGGTATCACGAAGCGCAGGAAACGATCATTTTTAATGACTGCGCTATATCTGCAGATAAGCGGTGCTTTGACCCCTTCCGACGCTTTTAAAGGCGTCCAGTCGCAGGGAGATGCGAGGGTTGAAATGTCAGCATCGCACATGTGTGAAGGGTGCTAGCGCTCAGTGGAGGAGGAAACAGGTGTCTTTTGGAGGCGTCACATTGACGCAGTGCCGCCCCGGCCCTCCCTCATTAACTCACTGTGTCCGAACAATGGAGCGATACAAAGCCAACCTCTCCTGTCAAATCGCTACACGCTAGACTGCGCCCTTTTTATTTGCTCGCAGTAAACCACGTGAACTGCGTTTCGAAAGTTCAACAACTGCCAAAACCTTCAGATCGTCATTTTTTTTACGAGTAATACAAGGTGATGTGTTCATGCATTTGTTTGGAAGTGTTCTTTATTtcctatacttttttttttttaattagcgaTTCGggaaacactttacaataaggtcgAATTTGTTAACACGAATGTATTAGGAATCATGATTCAGCAACAAAAAGCTTTTTGACAGCATTGATTCATATAAAGTcatgttcatttataaatgtgctGTGGGAGTATTCATAATTCGTAGCTAATATTTCAAAGCTAATTAGGAATTAAAAGAACGTTAAAAGGGTTAAAAATGGATTATCATttcaaagtttggggtcggtaagatttgtcattttattttgcatattaagATAAGATGCGTATTTCTGTTAAAGACATTTTGctcaccaagtctgcatttatgtaataaaaaagaaagtgctgttgaaataatattgcaattcaaaacagctttttgtaatttattcctgttgtTACAAAGCCGACTTTTTCTGTAGCAACTTACTGAACGAagagaaagttcaaaataactttactttttgatcatttttggtaacatcataaataacggcaaaaataaaataaaaatcaaatctcGACAAACCCAGCCTTTGGAATGGTAGTAACCTAACTAGCTATTATAGGTagcactttaaaaatatatattcttcatAGTGAGCTCACGATACCTTTAACCTTTACATTATGTCTTATtgcaaagtgttaccaaaatgtgtttgttttacccattttttccttttttttaaatgcctacCTTCAGTAAATGGGGTGAAATGCTCCTCTGATTTTGCATTCGAATACTTTATCCTGCCCCGAGTACGTTAGAGACAGCAGCAATACTTTATTGCCGATCATGGTACGTCATATATTATAACCCTTTAATGATTATTTACGAGATGCCTTATGTTAATTCTTCTAAATGTTTTGATTCATAATCGCTGTCTCTTTTTTGTGACTAAATGTCATTGTGCCATATCGTTCTGGGATCTAAGCAGCAATAGAAACACACGTAGGGTCACGTGTGATtcttctccacacacacacccgagCACACGATGATCTCTCTGATTGTAGTTATTTTTGACTGTTATAATCATGCGTTTTGACATCATTCCATGTTTACAGCTCCTCtaccttttttttgtataatactATTGTGCCATGCATTTAGTGAAAGTGTGTAATGCCTTCGTGACACGGAGCAGCTCCACCAGCCTTACTGTGAAGCAGTGGTGCGGAGATCCTATGGACGTCTTCACTGTGTCTTCATCACTGCACGTCTGTCTCATGCCTCGGGCTGGATATATCTATGCCTGTGCATCATGCAACTGAACTCGTACACGCATTAACCGAACCACAATCTTAATCTGGTTTGAACAACAGTACGCTTTGAATGGCCATTTCAGCCTTTGCTTTCTTGTCGCGTGACGCTTTTAAAGAGAATTTTTGGGTTCTCTCAGTGGCCGTTGTGTTTTTCTTGATGCTGCGGCCGTTTCTGTACTTGAAGGTGGTTCTGGATGAAAATACGACGCGCGCAAGATCTTCAGCCTGCCGCCTTATCTCtgtttttgcctttaaaaatgatttttaatatgaaGAACGTTCTTTGTCACTGTATTCGAGTGAATTTTTTCACCTTCCTGGAT
>XM_043241055.1
AGAAACTGTTGCGCTCCAGTCCTCCACCGTTCCCACCGTTCCGCCTTATTTACACGTACAGAAGTGAAAGGTCGATCGGTTTCTGAGTTCGGCTGTTTCTGATAAACGTAGACCGTTTTGCAGACCACTGAagtcaaaaataacaataagttTCTGCCGTGACGGTTGTTACAGGCGAACTTTACGTACTTGTGAAGAATTGCCATCGAAAGAACGGTCTGTTTAACCAGTAGTACGCCAAGGTTGTTCTCCTATTCCCGTTTTTTCTTCCTCCCCACCAAACCCAGCCGAGATAAGGTCTGTGAAGATAATTGAAGATGTCGTCTAAGATGCAAAGCTCTAATAATATAGCCCAGGCCAGAAGGACTGTTCAGCAGCTACGGATAGAAGCTAACATAGAGAGAATAAAGatttctAAAGCTTCTGCGGACCTCATGCATTACTGCAATGAACATGCCAAGTACGATCCTCTACTTATGGGTATCCCAGCTCCGGAAAACCCTTTTAAGGATAAAAAGCCATGCACTATATTGTAGTGGGATGCTTGAACTCTTACCGTATGTTTTGACGTtcccttttattattttttttttaatagaaagaaTACGATCTTCAAACACTCGTTCACTCTTCGCCTTAAACCCCGAGCTATTATTTGATTGTATCCGCACCAGAAAAAGGAGAGTCAAAGCTCCcagtaaacaaatcatttgtggtgcaaagacaaaaacCGACCCATGAATGAGTTTTTCTGCTttagggcacagcacagatgaGTTGTTTGCTTTGTGATAGTGTCCACTGATGTGGTCGTGTCTTCTGCAAATAAAGGGTGAGGTCAGAGTGGGCGGCTCTCGGTATCACGAAGCGCAGGAAACGATCATTTTTAATGACTGCGCTATATCTGCAGATAAGCGGTGCTTTGACCCCTTCCGACGCTTTTAAAGGCGTCCAGTCGCAGGGAGATGCGAGGGTTGAAATGTCAGCATCGCACATGTGTGAAGGGTGCTAGCGCTCAGTGGAGGAGGAAACAGGTGTCTTTTGGAGGCGTCACATTGACGCAGTGCCGCCCCGGCCCTCCCTCATTAACTCACTGTGTCCGAACAATGGAGCGATACAAAGCCAACCTCTCCTGTCAAATCGCTACACGCTAGACTGCGCCCTTTTTATTTGCTCGCAGTAAACCACGTGAACTGCGTTTCGAAAGTTCAACAACTGCCAAAACCTTCAGATCGTCATTTTTTTTACGAGTAATACAAGGTGATGTGTTCATGCATTTGTTTGGAAGTGTTCTTTATTtcctatacttttttttttttaattagcgaTTCGggaaacactttacaataaggtcgAATTTGTTAACACGAATGTATTAGGAATCATGATTCAGCAACAAAAAGCTTTTTGACAGCATTGATTCATATAAAGTcatgttcatttataaatgtgctGTGGGAGTATTCATAATTCGTAGCTAATATTTCAAAGCTAATTAGGAATTAAAAGAACGTTAAAAGGGTTAAAAATGGATTATCATttcaaagtttggggtcggtaagatttgtcattttattttgcatattaagATAAGATGCGTATTTCTGTTAAAGACATTTTGctcaccaagtctgcatttatgtaataaaaaagaaagtgctgttgaaataatattgcaattcaaaacagctttttgtaatttattcctgttgtTACAAAGCCGACTTTTTCTGTAGCAACTTACTGAACGAagagaaagttcaaaataactttactttttgatcatttttggtaacatcataaataacggcaaaaataaaataaaaatcaaatctcGACAAACCCAGCCTTTGGAATGGTAGTAACCTAACTAGCTATTATAGGTagcactttaaaaatatatattcttcatAGTGAGCTCACGATACCTTTAACCTTTACATTATGTCTTATtgcaaagtgttaccaaaatgtgtttgttttacccattttttccttttttttaaatgcctacCTTCAGTAAATGGGGTGAAATGCTCCTCTGATTTTGCATTCGAATACTTTATCCTGCCCCGAGTACGTTAGAGACAGCAGCAATACTTTATTGCCGATCATGGTACGTCATATATTATAACCCTTTAATGATTATTTACGAGATGCCTTATGTTAATTCTTCTAAATGTTTTGATTCATAATCGCTGTCTCTTTTTTGTGACTAAATGTCATTGTGCCATATCGTTCTGGGATCTAAGCAGCAATAGAAACACACGTAGGGTCACGTGTGATtcttctccacacacacacccgagCACACGATGATCTCTCTGATTGTAGTTATTTTTGACTGTTATAATCATGCGTTTTGACATCATTCCATGTTTACAGCTCCTCtaccttttttttgtataatactATTGTGCCATGCATTTAGTGAAAGTGTGTAATGCCTTCGTGACACGGAGCAGCTCCACCAGCCTTACTGTGAAGCAGTGGTGCGGAGATCCTATGGACGTCTTCACTGTGTCTTCATCACTGCACGTCTGTCTCATGCCTCGGGCTGGATATATCTATGCCTGTGCATCATGCAACTGAACTCGTACACGCATTAACCGAACCACAATCTTAATCTGGTTTGAACAACAGTACGCTTTGAATGGCCATTTCAGCCTTTGCTTTCTTGTCGCGTGACGCTTTTAAAGAGAATTTTTGGGTTCTCTCAGTGGCCGTTGTGTTTTTCTTGATGCTGCGGCCGTTTCTGTACTTGAAGGTGGTTCTGGATGAAAATACGACGCGCGCAAGATCTTCAGCCTGCCGCCTTATCTCtgtttttgcctttaaaaatgatttttaatatgaaGAACGTTCTTTGTCACTGTATTCGAGTGAATTTTTTCACCTTCCTGGATCCTAATGTGCCGAAGTTGTAGATGTTGTCTTTTTCCAactaaatatagatttattcTCAA

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K04347 GNG12; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12

RNA

RNA id representative length rna type GC content exon number start site end site
TU65676 False 2872 lncRNA 0.40 3 10948752 10985098
XM_043241055.1 True 2966 mRNA 0.40 3 10948692 10985132

Neighbor

gene id symbol gene type direction distance location
sec16b sec16b coding downstream 5075 10930570 ~ 10943617 (-)
LOC122346899 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 coding downstream 219423 10717881 ~ 10729269 (-)
LOC122346769 LOC107733892,LOC107555367,LOC107703995 coding downstream 425996 10517118 ~ 10522696 (-)
cfap52 cfap52,LOC107757424,LOC107659863,LOC107703996 coding downstream 431728 10509922 ~ 10516964 (-)
grb2a grb2a,grb2,LOC107733915,LOC107728184,LOC107704009,LOC105012273,LOC107659857,LOC108441871 coding downstream 521282 10411701 ~ 10427410 (-)
dr1 dr1,LOC107555385 coding upstream 392 10985524 ~ 10988423 (-)
zgc:109982 LOC107678358,LOC106920129,LOC103368644,LOC103139842,LOC107733899,LOC105940069,LOC103463988 coding upstream 5843 10990975 ~ 10996060 (-)
scinla scinla,LOC107730699,LOC107675434,LOC107564434,LOC107678357,LOC107733908 coding upstream 11265 10996397 ~ 11005424 (-)
si:ch73-389b16.1 si:ch73-389b16.1 coding upstream 25866 11010998 ~ 11013344 (-)
btbd8 si:ch73-389b16.2,LOC107749984,LOC107678356,LOC107675433,LOC107730686,LOC107555388,LOC107564439 coding upstream 31760 11016892 ~ 11041029 (-)
G44353 LOC107569358,LOC107704001,LOC107555380,LOC107733907,LOC107757425,LOC107660462,LOC105019150,LOC108438877 non-coding downstream 44395 10694602 ~ 10904297 (-)
G44350 NA non-coding downstream 53340 10687060 ~ 10895352 (-)
G44341 NA non-coding downstream 295322 10646133 ~ 10653370 (-)
G44339 NA non-coding downstream 366408 10582033 ~ 10582284 (-)
G44338 NA non-coding downstream 366663 10581409 ~ 10582029 (-)
G44447 NA non-coding upstream 247319 11232451 ~ 11232784 (-)
G44449 NA non-coding upstream 249358 11234490 ~ 11234694 (-)
G44450 NA non-coding upstream 249743 11234875 ~ 11235096 (-)
G44452 NA non-coding upstream 252830 11237962 ~ 11238198 (-)
G44457 NA non-coding upstream 253987 11239119 ~ 11239464 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 113167 10578989 ~ 10835525 (-)
G44358 zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC107660467 other downstream 231951 10710045 ~ 10716741 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other downstream 439689 10434204 ~ 10509003 (-)
LOC122347367 NA other downstream 589842 10355877 ~ 10358850 (-)
tnrc6c2 LOC107701838,LOC107566423,LOC107754870,LOC107591908,LOC107718711,LOC107698681 other downstream 705267 10204617 ~ 10243425 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other upstream 69903 11055035 ~ 11069466 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other upstream 1540624 12525756 ~ 12897718 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 2670128 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 2733070 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 3175343 14160475 ~ 14193166 (-)

Expression


Co-expression Network