G44449


Basic Information

Item Value
gene id G44449
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 11234490 ~ 11234694 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65788
TAAATAAATCTACCTCATAAATGTCCTCCAATTTGTCCTTTCTGAAGAGAAACTGATCAAAATGCACGCTTAGACCATTTATTATGATTCATACCTAGCCATCTTTTTTTCAAACCCCCTCTCATTGCCTACAAAGATGGCACTGTAGACTGCCTCAGTGATATACACTGTCATCTGTCACCTTAATGGGAGAATTTAATGCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65788 True 205 lncRNA 0.38 1 11234490 11234694

Neighbor

gene id symbol gene type direction distance location
ephx4 ephx4,LOC107555389,LOC107564433,LOC107678348,LOC107730701,LOC107749983,LOC107675432 coding downstream 179643 11042046 ~ 11054847 (-)
btbd8 si:ch73-389b16.2,LOC107749984,LOC107678356,LOC107675433,LOC107730686,LOC107555388,LOC107564439 coding downstream 193461 11016892 ~ 11041029 (-)
si:ch73-389b16.1 si:ch73-389b16.1 coding downstream 221146 11010998 ~ 11013344 (-)
scinla scinla,LOC107730699,LOC107675434,LOC107564434,LOC107678357,LOC107733908 coding downstream 229066 10996397 ~ 11005424 (-)
zgc:109982 LOC107678358,LOC106920129,LOC103368644,LOC103139842,LOC107733899,LOC105940069,LOC103463988 coding downstream 238430 10990975 ~ 10996060 (-)
znf326 znf326,LOC107749979,LOC107698885,LOC107564631,LOC107555393 coding upstream 175368 11410062 ~ 11414618 (-)
lrrc8db LOC107749977,LOC107730703,LOC107698886,LOC107564626,LOC107675437,LOC107555394 coding upstream 180574 11415268 ~ 11424793 (-)
lrrc8c LOC107749978,LOC107593158,LOC107698887,LOC107564627,LOC107675427,LOC107730691 coding upstream 194180 11428874 ~ 11437103 (-)
pkn2b zgc:153916,LOC107749976,LOC107662805,LOC107564625,LOC107698884,LOC108413223 coding upstream 215143 11449837 ~ 11481193 (-)
lmo4b lmo4,lmo4b,LOC107593176 coding upstream 460954 11695648 ~ 11708480 (-)
G44447 NA non-coding downstream 1706 11232451 ~ 11232784 (-)
G44353 LOC107569358,LOC107704001,LOC107555380,LOC107733907,LOC107757425,LOC107660462,LOC105019150,LOC108438877 non-coding downstream 330193 10694602 ~ 10904297 (-)
G44350 NA non-coding downstream 339138 10687060 ~ 10895352 (-)
G44341 NA non-coding downstream 581120 10646133 ~ 10653370 (-)
G44339 NA non-coding downstream 652206 10582033 ~ 10582284 (-)
G44450 NA non-coding upstream 181 11234875 ~ 11235096 (-)
G44452 NA non-coding upstream 3268 11237962 ~ 11238198 (-)
G44457 NA non-coding upstream 4425 11239119 ~ 11239464 (-)
G44459 NA non-coding upstream 6943 11241637 ~ 11242032 (-)
G44460 NA non-coding upstream 7583 11242277 ~ 11242506 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 165024 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 249358 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 398965 10578989 ~ 10835525 (-)
G44358 zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC107660467 other downstream 517749 10710045 ~ 10716741 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other downstream 725487 10434204 ~ 10509003 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other upstream 1291062 12525756 ~ 12897718 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 2420566 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 2483508 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 2925781 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 4092889 15327583 ~ 15330851 (-)

Expression


Co-expression Network