G44588


Basic Information

Item Value
gene id G44588
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 12087399 ~ 12092455 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU65993
CAATGGTTTCTGCATGCAGGTGGCCTAGCATGGGCTGGGCTCCAGCTGCTGCGATCCGTGAGGGAACATTGGACGGTCCCGGTCCTAGCATAAGACGCTGGGGGACGGGGAAAGGCTGTAACAGGCATTCCGGTGGAAGAACAGACAGAGAGGACATAATGCTGCTGCGACACTGACAGACTGAGGCAATGGTTAACTCATGTAAACGTTTACAAAGAGGATGGTGTCTGGTGCTGGATAAAGAGATGCTTTCCCAGAGGCTGAGAACTGAAAGAGCCATGACTATAAACCACCTTCCCGCGGACTACAGTGGCCTTCACCCTCCCTCGCAGAACAAGACCAAGAACGCTGCCTGTGCCCTGGAGCTGTTTCATAGCTGCATGCAGATCAGCGTCGCTCACATGAGGAAACTCATCCACCCCGCTGTGAATCAGAAAGCACTTAAATCCAGCAACGCCGGCGTGAACCATCGGCCTCAGCTCCAGCTGAGATTGACAAACAGAAAGTGAAGgcagagaaacaaagaaaatattgctattcattttattttgcaaatgttttttttatagcagtGGTTGGTGAAAAGTGAATCTTTAGGAGTGATTTGTTGAAGCACTTACTCAACTGATGCCTTCAAAAATGCTGAATCGTTCaagaaacaaacaagtaaatggctgtttaaagtaaatgtacttGCTTCTTTTGAATAAGTACTTTATAACT
>TU65995
CAATGGTTTCTGCATGCAGGTGGCCTAGCATGGGCTGGGCTCCAGCTGCTGCGATCCGTGAGGGAACATTGGACGGTCCCGGTCCTAGCATAAGACGCTGGGGGACGGGGAAAGGCTGTAACAGGCATTCCGGTGGAAGAACAGACAGAGAGGACATAATGCTGCTGCGACACTGACAGACTGAGGCAATGGTTAACTCATGTAAACGTTTACAAAGAGGATGGTGTCTGGTGCTGGATAAAGAGATGCTTTCCCAGAGGCTGAGAACTGAAAGAGCCATGACTATAAACCACCTTCCCGCGGACTACAGTGGCCTTCACCCTCCCTCGCAGAACAAGACCAAGGTACGGTGttaactgaaaagaaagaaaaaagtgaaaaaaaaaccccactttcTTTTACATGTTATGCTGAATAAAACTGAATCTACCTTGTTTTTGTGATGTATGTTATCTTCGTTCACCTAGGAAATGAAATGATATGCGTTCACTTGCAGGCTCCAAAAAGCTTTTGGTGTATTTATagaagatgacagaattttagcAACAAGCATGTTCCGTCTTGCTGTCAGTCGTTTTAGAGAATCTCATCTCAACCCCCTTGAGTGAGCGCCTGTCTTTCTCACCGTAAACTCTTTTTCTGGATCCCAGATGACTAAGTCTGCATCGTGACCTGGAACGAGACTCCCTTTTCGGTCGTCAAGGCGACAGAGTTGAGCAGGCTCTTTACACAAGAGTCTTACTGCGTCGAAAAATGAAAACCCTCTTTTAGAAGCTGATGTCCAGAACAAAGATAAACCTGTTGGTAAACAGCCAGATGACAATTTTAGTAACGCCGTATAAAGCGTGTCGCAGGTCTTTGCTTGCTCTAAATACACCGTGAACAGTGTTGCATTTGGTTAGCTTATGATGCCATTAATTTCTGCACAAATTCCTTTGgccataaaatatgtaaatttgcTAATCACAGTTTACATATACAGTTCAAGGTGGAAAAAgtaagtaaacattttttggaagCAGTAACACTACCATAAGTAGTATAATTACTGATGATGAGACTCGCACTATTCCTCACTATTATTTAGCGTCAATCCAAAGGCCtattttcttctgctgaaccCTTTTCGTTGTTGATTTACATCTGATCTTTGGGTCAGTGTCCTATTGCATCACTCAACTTCTGTTGAGCTTCAACTGGTAGACAGATGGCCTTTCATTGATGCAAAATGTTGTAAAACGTGATCTTCACCTTTCCATCAATGATAGCTAGCAGACCAGACACTTTTAGATTTAGAAAACTAGCTCTAAAACGCTAGCTTGAGATGTTGATGTTTGTGTGCCGTGTCATTCTCCTtaaccttttaaatgttttctagaCAGCTTTGGTTATTTGTTGAAACGGTTGCTAATAGTAACGAGGAACACCCTAATCAGTCTGTGTTCGTCTTTTGTTGAGGTCAAATTTTATGACCAGTTGAGGCAGAATTCCATGTTAAATGCAAGTTCATATGCTTCATTAGTACAAAAGTAGATATTTGTTTAAGCCGATTCCAGTCTGGGACTCTATCTTGATCCctgaatgtcatttttttagttaatcATTAGTCTGATTGGTAAATTGTTGGTGGACCACTGTTTGCCTCACAAAGGACTTTGTCCATCATGTGAGTGATCATTGACAGCCTACCAAACTGCAGAGAAGAGATCCCTCCCCACGCCTGTGTGAAATCACCACTGTTTAAACACTTTAGGTCAGGTGTGCATGGCGAATGATCGGACACAACCATATCAATATCACCAGCTTTGAGTGCAGACCATAGGAGCTcttaaaaagaaacagattATAGTTTTACTATAACAGATTATGTTTGGAATGCACTATAATTAAGGTTTGTGGAAGTATATgaataaaggttaaaaaaatgaGATAACTCTGTAGGAATTTAGTAGAGATTAAGTGATGCCCGatttgtaaataattcatttatattcgAGAGTTCTGTGACAGAGAAGTCCGAGATTAGTCTTAATTTGGAAATTAAGATTcacctccattttttttatctgtttcgAAAGCCTATCTGGGTATGCTGTTTCGGTCACAGCCAAAGCAACATATTGGTTATGTGTGAACACACAAATCTgatttaaatcacaatttataACGCAGACAGCCTGCCTGAAAAGATTCGATttgaggaaaataaaaacactgatttgctTACAGTCTGGACCTAGCCATTGAATCTGTTGATCCAGTTCACATAACTGGTCAAATTCATTCACAAACAAGACTGATATAGTTCCAAGGGACAACTGAGACTGGAGGCAAAAACATATCagtaaattttcatttgttcctctcacaatatactgtatgaCTCCTGAAAACCTGAAATATATGTCACTGGTGGTTTAACATCCTTTTTTTGATTCTTGAAATCTCTTCATCACTTGTAAttgcatgtgaaaaaattacCTGTGTGTTCTTAAAAATGTAGCTATCCTCAGaagaaagtcattcattttaaggTCATCAATTACTTTTATGAGTTTCAATGtcgattttacattttagaaatattaccAAGACCAATTTGTGCTGATCAGCTTTTTCTTTCAACCTGAACCTGTTTTCGTTGTCTGTGATGCTCATTGTTCTTACCCGGTTGGCTGTGTCTCGTATCGGGGGGCAGCATTTAAACTGAGTTGCACGTGCTGGAATGTCCTCTGCACACAGGCTGAGGTAGTGATGGGTGCTCTCTACAGTCAGTGGAGCTCCAGCCTTTCTTGCTGCCCTAATGAGCTCCAGAGGCTGGGCTGATGACAGATGCACAATGTGGCATCTTACTCTGATAAAAAGAACGGAAAAATGCTGACTTCTCACCTCATCTCTTGGCTGGCTACTCACAGTGAGCAGAAGCAGCTATTAGATAATCAAAGGTTGATTCTCATCGTAACATACTGATATTGTAAGCAGAGCTGAGTGACGGTACGGATGGCCTCGAGCTCCATAATGTCAGGCCTGGTCTTTAGGAAGGTGGAATATTCTTGTGGATCTGAGTTAGAAAGTAAAGCAGGAATTtctatgtttaaaataatacacgTTCATGATTTCAAGTAGAACCATCACTGAAACAATCGGTCTCATACCCCCTTTCTCAGCAGCTGCATGCTGGACTTCTTTCTCTGCATGAAACTAAACCGAATAGGTTTCATTAATTTAAGTTGCAcaattatatttctattatattacgcccaataataaattatgtctgaccagatgcatttttttcattttaccatTGGTACTGATTCTAAGTTACTCGTTATGGCAGAAATGTTTCATGAAATCAGATATCAGATTGAAATGATCGGGGCAAGCACAAAATGAGATGTCTCACCAGCAGAACGCTGCCTGTGCCCTGGAGCTGTTTCATAGCTGCATGCAGATCAGCGTCGCTCACATGAGGAAACTCATCCACCCCGCTGTGAATCAGAAAGCACTTAAATCCAGCAACGCCGGCGTGAACCATCGGCCTCAGCTCCAGCTGAGATTGACAAACAGAAAGTGAAGgcagagaaacaaagaaaatattgctattcattttattttgcaaatgttttttttatagcagtGGTTGGTGAAAAGTGAATCTTTAGGAGTGATTTGTTGAAGCACTTACTCAACTGATGCCTTCAAAAATGCTGAATCGTTCaagaaacaaacaagtaaatggctgtttaaagtaaatgtacttGCTTCTTTTGAATAAGTACTTTATAACT

Function

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0006508 proteolysis biological_process
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU65993 False 723 TUCP 0.47 3 12087399 12092455
TU65995 True 3791 lncRNA 0.40 2 12087399 12092455

Neighbor

gene id symbol gene type direction distance location
atg4b atg4b,LOC107696761,LOC107552278,LOC107593167,LOC107694120 coding upstream 5371 12075450 ~ 12082028 (+)
boka boka,bok,LOC107733256,LOC107752647,LOC107696759,LOC107694130 coding upstream 12835 12065298 ~ 12074564 (+)
farp2 farp2,LOC107694112,LOC107696757 coding upstream 32389 12011095 ~ 12055010 (+)
trnai-aau_2 NA coding upstream 114355 11972971 ~ 11973044 (+)
dzip1l LOC107679858,LOC107756183,LOC107593178,LOC107751311,LOC107577891 coding upstream 285603 11791670 ~ 11801796 (+)
kif1aa kif1aa,kif1a,LOC107696745,LOC107694128,LOC107552277,LOC108427666,LOC107593169 coding downstream 5225 12097680 ~ 12152964 (+)
LOC122346457 scly,LOC107552249,LOC107552250,LOC107752645 coding downstream 346645 12439100 ~ 12444241 (+)
LOC122346426 klhl30,LOC107753621,LOC107694118,LOC107696751,LOC107752665,LOC107593185 coding downstream 372087 12464542 ~ 12469417 (+)
LOC122347050 tmem131,LOC107659030,LOC107692350 coding downstream 612190 12704645 ~ 12731083 (+)
LOC122346842 LOC107752644,LOC107696763,LOC107593183,LOC107552264,LOC107753650,LOC107694115 coding downstream 648364 12740819 ~ 12760408 (+)
G44575 hdlbp,LOC107733253,LOC107694132,LOC107552253,LOC107696756,LOC107752661 non-coding upstream 93262 11993558 ~ 11994137 (+)
G44574 hdlbpa,hdlbp,LOC107752661,LOC107694132,LOC107733253,LOC107696756 non-coding upstream 109988 11937101 ~ 11977411 (+)
LOC122347449 NA non-coding upstream 381473 11689692 ~ 11705926 (+)
G44521 NA non-coding upstream 443701 11641081 ~ 11643698 (+)
G44483 NA non-coding upstream 658569 11427845 ~ 11428830 (+)
G44604 NA non-coding downstream 384669 12477124 ~ 12482182 (+)
G44606 LOC107593190,LOC107696746,LOC107552261,LOC107753661,LOC107694109,LOC107752664 non-coding downstream 400498 12492953 ~ 12493642 (+)
G44611 NA non-coding downstream 471637 12564092 ~ 12671665 (+)
G44622 NA non-coding downstream 572365 12664820 ~ 12699577 (+)
G44615 NA non-coding downstream 990925 13083380 ~ 13084230 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other upstream 76860 12002147 ~ 12010539 (+)
G44478 LOC107749977,LOC107730703,LOC107675437,LOC107564626,LOC107698886,LOC107555394 other upstream 667069 11415273 ~ 11420330 (+)
pik3r6a zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC105903457 other upstream 1194939 10882960 ~ 10892460 (+)
LOC122347096 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 other upstream 1204500 10870378 ~ 10882899 (+)
atad5b LOC107578257,LOC107710017,LOC107669538 other upstream 1963874 10116617 ~ 10123525 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other downstream 61813 12154268 ~ 12159899 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other downstream 429318 12521773 ~ 12526957 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other downstream 673366 12765821 ~ 12805700 (+)
smx5 lsm2,LSM2,smx5 other downstream 988110 13080565 ~ 13082119 (+)
G44645 NA other downstream 1016280 13108735 ~ 13109366 (+)

Expression


Co-expression Network