G44887


Basic Information

Item Value
gene id G44887
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13394229 ~ 13409912 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU66465
TGTATGGCTTCCCCACCCGATCACTGCTGCTTATGTGCCTGAACAAATGTAAGAAAAAGGCATCATTAGACCCGCTAGAAGAACAAATGTTTGTCCTTCACAGCAACATGGTTTCCTTGTCTTAATACAGGCATTCTAAGAGCATGGCATTGCGATGGAGTATCCTCTAGGATTAGAAAGGGGAGCACTGTTAGTTGGAAGAAAGGCAAGTTaacatgtttgcattttacCAGAGATGAGAATCAAAGTGTGGAAGGCCAGGCAGATCACAAAAGTGAAAAGTCTATTTTACTTCAACATTTAAATCACTACTGCTCCGGTCTTCCACAGCTGACATcaaatctgtataaaaacactgaaggaCTGTGGTCTCTGCCCACACAAGTTCACATAGAAGAGACTGAGACAGCAGAGATCAGACTTGGGACTGCCGAGACAGAAACTGCTGGTGAAGAAAGGCACGAGGTGGCAAATGTTTAGAGGTCAAAACAGCCAACAATGCCAGAAAGTGACAAGACCTGTGGTTCAGCTCCCACCATTCCAAGTGCTGTTTGTGAATTCTACTACACATGCATATGAATGTCTGCTAGTGGATGACAAAGTAGAAAATTCTAGAATGCCCGTCTACTCTGACGATATTCTCAGAAGAATTttaacaggaaacaggaaattCAAAAGGATGAAAAGGTTGTACTGTAGATTTGTACTATTAGATGCAGATGCACATGGTGTTAGAGCATACATGAGTGTGCCGCTTAATCAGGGTTTTAAAAACCGCTACAATGAGCTAAAGCTGACAGCGCCACCTCGTTGGCATGTTGCAGAAACTGGATGCACGCCGGTGGGGGCACagacaaaacattaacaaaatctTACCGATCCAGTATTCCCTTGTCTGGCCAGGGTAGATTGAAAGACATTCTAGTGTGAAATAACAAGGCATAGGTCGGGAGGATGGTTAAAACAGAAAgacattaaaaggaaaaaaaaaaaaaaaaaaaaaaaaaaatactgattAAGGACCCCAATGTCTGTAGttgacaattaaattaaaattatataaatcaaaaaGATTCACATTTGTCACACCAATTGGCAGGGGAGGCTGAACATGAACAAATGAGTACTGTTGCAAGTTGCAAGATAGCCTAAGCCATACTCAATGAGGGAGGATTTGAGCTATGCCACTGATGATTTGATATCAAACAAAGCAGCCATCAGTCTTTTTCACTTGCTTTCTGCTTTATCTTGATTCTTTTTGCCGCTCCTCCACAATTTCCTGTGCCACCTTCCAGTACTCATAACAACTAGTGTAAACACGTGGTAGCAGAACTTGTCCGGCCTTCTTTTTCATTGACAATTATCATCTTTATAAtgaagtacaaaaaaacaaaaagaaaaaaaaagggtaatGGGATGGTTACTGTGGCCCGGCAGTAGAGAGTGGCAAAAGGAGGCAAAAGTTATAGAGTGGGAGGCTTGAGCCCATACTTCTTGGCCACCTCTGTCTGGGCATAAGCAGCATCACAGAGGGAGTAGAGATGGGCCATCTCCATCTCTGACTTGGCCAAGTTAATGGCCTTGTTGAACATGTCTATAGCCTTGTCCAGATTGCctctgtggagaaaaaaaaatgcaagttggtttttttgttttacattttgtccgaaactaaaattaaaaggtTGCAATAGCCACATAAAAGTTTCAATGTAATCAATGCTTTACAAATTAGGAATTGAAAAAATGGGAAGCAATGTAACCTCACA

Function

GO:

id name namespace
GO:0006644 phospholipid metabolic process biological_process
GO:0007034 vacuolar transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66465 True 1769 TUCP 0.41 2 13394229 13409912

Neighbor

gene id symbol gene type direction distance location
tp63 tp63,LOC107574491,LOC107590651,LOC107659018,LOC107752631,LOC107696778 coding upstream 3578 13350521 ~ 13390651 (+)
tprg1 tprg1,LOC107590652,LOC107751286,LOC107684336,LOC107552257,LOC107696755,LOC107752662 coding upstream 60655 13314057 ~ 13333574 (+)
LOC122346939 lpp,LOC107684332,LOC107590653,LOC107717931,LOC107696776,LOC107752632,LOC107552245,LOC108427685 coding upstream 115049 13119195 ~ 13279180 (+)
inpp5d LOC107694111,LOC107590654,LOC107717933,LOC107696774,LOC107552268,LOC107752650 coding upstream 314183 13065838 ~ 13080046 (+)
gpr17 gpr17,LOC107752663,LOC107717943,LOC107694121,LOC107590682,LOC107552259,LOC107696754 coding upstream 329800 13058859 ~ 13064429 (+)
LOC122347353 LOC107731845,LOC107659022,LOC107692422 coding downstream 59492 13469404 ~ 13471933 (+)
rpl5b rpl5b,rpl5,LOC107659024,LOC107590646,LOC107732018,LOC107566486,LOC107692344,LOC103368809 coding downstream 126599 13536511 ~ 13542567 (+)
atp1b1a NA coding downstream 188627 13598539 ~ 13607514 (+)
zgc:172121 zgc:172121,LOC107659029,LOC107692348,LOC107732016,LOC107590642,LOC107731828 coding downstream 229082 13638994 ~ 13644273 (+)
si:ch211-201h21.5 si:ch211-201h21.5,LOC107659008,LOC107731846,LOC107590672 coding downstream 242484 13652396 ~ 13655156 (+)
G44886 NA non-coding upstream 36241 13357403 ~ 13357988 (+)
G44885 NA non-coding upstream 37605 13356269 ~ 13356624 (+)
G44884 NA non-coding upstream 43796 13350198 ~ 13350433 (+)
G44881 NA non-coding upstream 47082 13346880 ~ 13347147 (+)
G44879 NA non-coding upstream 48285 13345264 ~ 13345944 (+)
G44898 NA non-coding downstream 6847 13416759 ~ 13416972 (+)
G44899 NA non-coding downstream 7646 13417558 ~ 13417840 (+)
LOC122346508 NA non-coding downstream 179973 13589885 ~ 13594601 (+)
G44997 bivm,LOC107732014,LOC107659026,LOC107548643,LOC107731835,LOC107692346 non-coding downstream 240203 13650115 ~ 13650883 (+)
LOC122346715 NA non-coding downstream 246280 13656192 ~ 13657766 (+)
G44645 NA other upstream 284863 13108735 ~ 13109366 (+)
smx5 lsm2,LSM2,smx5 other upstream 312110 13080565 ~ 13082119 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 588529 12765821 ~ 12805700 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other upstream 867272 12521773 ~ 12526957 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other upstream 1234330 12154268 ~ 12159899 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other downstream 562261 13972173 ~ 13980286 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 1826253 15236165 ~ 15244280 (+)
G45419 sgip1,sgip1a,LOC107739126 other downstream 1948949 15358861 ~ 15459386 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other downstream 2155069 15564981 ~ 15566668 (+)
G45894 NA other downstream 3776796 17186708 ~ 17187308 (+)

Expression


Co-expression Network