G44924


Basic Information

Item Value
gene id G44924
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13335885 ~ 13336625 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU66512
GCTTACCAAGTAAGAAACGTGCACTATAACTAACAACCAGTATATAACTTTGCAAGCTGATGGAGCAAAACCCGAAGCATCCGCCAGATAAAGACTCCATAAAGCATATCTGccccattcatttatttctgaatgcGTGAAACATTCTCTCCATTGACTGCAGCTGCATGACAGTTCTTATACGAATTTACCTCACAgtaaacatttagatttaatattcATAGGGTAGCAATTTGGCCATTTTTATGTATTGGTCTATGGGGCACCGCATGTATTATATTTGCTTGCTCGTCACTTTCTACTTCATCGTTTTACATGGTCTCTTATTTGAATGCAAAGCACGGGCTGTGACGCCTAACATTGTTAACACCTTAGGCAAGTAAACACTGCATGAACAATCAAGTTGCTTTCCTTTACCAGAACATGCAAATGCGACTTCACCTTTAACAGGTTCCCATTCAAGCAAAGCTCAATCCGAGCTTTTCcacgaaagaaaaaaactctCCCGTCTTTCCTTCACCCCTTAAAACGGTGCTAACTTAGCATAGCTTAAAGAAACCCTCACAAAAACGTACAAATTCGCGATGCGTGCACCCTACGTTATCTCAGGTGTAAATTATAACAGTGAACTCAACTTGCTCAAATGCAGAAGTTCTCAAAAGCACGTAAAAACTACATGCTTTTGGTTTAACATTACTACCGCTTGAACCCCGTGTGTGTTTGCTTCGTTTAGAAACTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66512 True 741 lncRNA 0.40 1 13335885 13336625

Neighbor

gene id symbol gene type direction distance location
bcl6aa bcl6,LOC107717934,LOC107752633 coding downstream 226661 13086100 ~ 13109224 (-)
trnap-cgg_1 NA coding downstream 364336 12971478 ~ 12971549 (-)
trnap-ugg_5 NA coding downstream 364731 12971083 ~ 12971154 (-)
im:7152348 LOC107717945,LOC107694124,LOC107590683,LOC107752641,LOC107696753,LOC107552260 coding downstream 365257 12967100 ~ 12970628 (-)
LOC122346505 sox14,LOC107679857,LOC107756185,LOC107713406,LOC107694108,LOC103365676 coding downstream 1071172 12262919 ~ 12264713 (-)
tbc1d23 tbc1d23,LOC107731832,LOC107590650,LOC107574489,LOC107752629 coding upstream 54078 13390703 ~ 13407082 (-)
tomm70a tomm70,tomm70a,LOC107659020,LOC107696780,LOC107574490 coding upstream 70941 13407566 ~ 13416487 (-)
trnaa-cgc NA coding upstream 84022 13420647 ~ 13420718 (-)
trnaa-cgc_1 NA coding upstream 84204 13420829 ~ 13420900 (-)
trnaa-ugc_1 NA coding upstream 84695 13421320 ~ 13421391 (-)
G44863 NA non-coding downstream 56003 13279683 ~ 13279882 (-)
LOC122346940 NA non-coding downstream 92214 13214042 ~ 13243671 (-)
G44798 NA non-coding downstream 309676 13025107 ~ 13026209 (-)
G44787 NA non-coding downstream 346578 12989105 ~ 12989307 (-)
G44784 NA non-coding downstream 350750 12984812 ~ 12985135 (-)
G44925 NA non-coding upstream 1343 13337968 ~ 13338425 (-)
G44926 NA non-coding upstream 2472 13339097 ~ 13339560 (-)
G44928 NA non-coding upstream 6019 13342644 ~ 13342947 (-)
G44932 NA non-coding upstream 10142 13346767 ~ 13346971 (-)
G44937 NA non-coding upstream 13063 13349688 ~ 13350214 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 438167 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2266419 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2350753 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2500360 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 318635 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 381577 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 823850 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1990958 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2152493 15489118 ~ 15490685 (-)

Expression


Co-expression Network