G44938


Basic Information

Item Value
gene id G44938
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13352462 ~ 13353069 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU66528
TGCTTTGCAATATGCGCTCGTATCCATTTACAAATCAAGCAactaaataaaaccacatgcacCATGTGTGCATGCCCAAGTAAGTGGTCAAGACAAACCTAGTGACCCTACAAATGGGGTTTCAGAACTGGCCAACAAACTGTAACTGCCGTCTTACCGTTGAAAAGCTCGCTCTGGGCAGAACTGTACTGCTGCATAAGGAGAGGTCATACTGCCAGACTGGGGTCTTTACTGAGGTCGTCAAGGTTATCGCCAAGTGGCCCAAGCACATGTATTACAGCAGATCTGGagttacaaataaatgaaaaacatgaaaaacaaacaaaaaagaaactctGAGGCAGATTAAAGTGCTAGAAGGTCAAGTGCACAGGAGTGAATCAAGTGTGGAGgatgttttaattttggtttaatCTTTCTACAGCACACAAGCAAAGGGGCGGCGTCAATGCCAACATGCTGACCAATCCCTGACAACAACTGGACATGGTATCATACCCCTTCAGTTGCTAGGATATAGATATTAAGCAACAACCCCCACCCATTCCATTTCTGGTCCATGTCCCCAGTGATGTCTGTCTAAGCACTAACCTGAAAAGCACATTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66528 True 608 lncRNA 0.44 1 13352462 13353069

Neighbor

gene id symbol gene type direction distance location
bcl6aa bcl6,LOC107717934,LOC107752633 coding downstream 243238 13086100 ~ 13109224 (-)
trnap-cgg_1 NA coding downstream 380913 12971478 ~ 12971549 (-)
trnap-ugg_5 NA coding downstream 381308 12971083 ~ 12971154 (-)
im:7152348 LOC107717945,LOC107694124,LOC107590683,LOC107752641,LOC107696753,LOC107552260 coding downstream 381834 12967100 ~ 12970628 (-)
LOC122346505 sox14,LOC107679857,LOC107756185,LOC107713406,LOC107694108,LOC103365676 coding downstream 1087749 12262919 ~ 12264713 (-)
tbc1d23 tbc1d23,LOC107731832,LOC107590650,LOC107574489,LOC107752629 coding upstream 37634 13390703 ~ 13407082 (-)
tomm70a tomm70,tomm70a,LOC107659020,LOC107696780,LOC107574490 coding upstream 54497 13407566 ~ 13416487 (-)
trnaa-cgc NA coding upstream 67578 13420647 ~ 13420718 (-)
trnaa-cgc_1 NA coding upstream 67760 13420829 ~ 13420900 (-)
trnaa-ugc_1 NA coding upstream 68251 13421320 ~ 13421391 (-)
G44937 NA non-coding downstream 2248 13349688 ~ 13350214 (-)
G44932 NA non-coding downstream 5491 13346767 ~ 13346971 (-)
G44928 NA non-coding downstream 9515 13342644 ~ 13342947 (-)
G44926 NA non-coding downstream 12902 13339097 ~ 13339560 (-)
G44925 NA non-coding downstream 14037 13337968 ~ 13338425 (-)
G44939 NA non-coding upstream 295 13353364 ~ 13353650 (-)
G44940 NA non-coding upstream 846 13353915 ~ 13354180 (-)
G44941 NA non-coding upstream 1238 13354307 ~ 13354783 (-)
G44942 NA non-coding upstream 3918 13356987 ~ 13357521 (-)
G45014 NA non-coding upstream 183875 13536944 ~ 13611593 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 454744 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2282996 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2367330 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2516937 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 302191 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 365133 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 807406 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1974514 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2136049 15489118 ~ 15490685 (-)

Expression


Co-expression Network