G45036


Basic Information

Item Value
gene id G45036
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13693338 ~ 13694164 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU66648
CAGCAAGGAAAGAAATCTTTTGTCATAGAAGTCAGTGGACCTGATGATAAACATCCTTTTCCCATGGCTCCCATGACGGACAAcTTGTCCTGAACGTGCAACGGTCCTGGAGAGCAGATTGGCGGACTGGCACGATCGTTTCAGCGGGTTTAATCGGGCTGTAAGAGCAGCCGCCGTCCGCAGAAGGCTCATGCCGGCCATGACTGTTGTGGGAAGCGCGTGAGCAAAAGCCTTCACTGATTGGCTCACAGCAAAGACGCGTTCTCCATTCACGCTTAGG

Function

GO:

id name namespace
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0042254 ribosome biogenesis biological_process

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU66648 True 280 lncRNA 0.53 2 13693338 13694164

Neighbor

gene id symbol gene type direction distance location
mrpl47 LOC107659009,LOC107732024,LOC107590634,LOC107709209,LOC107692352,LOC107548661 coding downstream 512 13691026 ~ 13692826 (-)
nme7 nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107548663 coding downstream 54393 13607516 ~ 13638945 (-)
dpt dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436 coding downstream 107970 13578792 ~ 13585368 (-)
zbtb11 zbtb11,LOC107731844,LOC107659025,LOC107590644,LOC107732022,LOC107692345,LOC107566487 coding downstream 123416 13562045 ~ 13569922 (-)
dipk1ab fam69a,fam69ab,LOC107590645,LOC107659006,LOC107566484 coding downstream 132313 13543207 ~ 13561025 (-)
lrrc7 lrrc7,LOC107709201,LOC107692363,LOC107739104 coding upstream 291883 13986047 ~ 14040163 (-)
cldn33b LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 coding upstream 432410 14126574 ~ 14128317 (-)
lurap1 lurap1,LOC107709195,LOC107590621,LOC107692438,LOC107591165,LOC107659044 coding upstream 485708 14179872 ~ 14190329 (-)
ttc4 ttc4,LOC107659046,LOC107738930,LOC107709194,LOC107692369 coding upstream 503528 14197692 ~ 14200743 (-)
pde4ba pde4b,pde4ba,LOC107659050,LOC107692372,LOC108443455,LOC107591166,LOC105913193 coding upstream 591333 14285497 ~ 14402960 (-)
G45014 NA non-coding downstream 81745 13536944 ~ 13611593 (-)
G44942 NA non-coding downstream 335817 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 338555 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 339158 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 339688 13353364 ~ 13353650 (-)
G45039 NA non-coding upstream 3335 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 129508 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 143141 13837305 ~ 13837538 (-)
G45064 NA non-coding upstream 148570 13842734 ~ 13848641 (-)
G45195 NA non-coding upstream 159733 13853897 ~ 13858117 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 12044 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 795620 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2623872 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2708206 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2857813 10578989 ~ 10835525 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 24038 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 466311 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1633419 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 1794954 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 1841222 15535386 ~ 15685485 (-)

Expression


Co-expression Network