G45070


Basic Information

Item Value
gene id G45070
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13860255 ~ 13860609 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU66694
TATCAAATCGATTACGTTTGCAACTTTCTGACATGACTCACGTATCTTCTCAGCAAGACATTCAGAGTGCGTCTGTTTCTTGGGGATTTGAGAGTCCAGACGTCTCTAGACCAGCAGGATCCACGTCGAACTGAACTGCTTCCGTTCAGGTGTTGCTCTCAATCTTTGTTGCCTTCCTATGACTCCGTTCATGCAGTGCATCTTCTCAAGGCCAAGCTTAAGCGTCCCGGGAATTCATAACATTGGCATGGTTCAGATTTGTACGGGTTAGTCGTCTCTCTGTTGATGTCTCTGTTTTAGCGATCCATTGGAAGAAAAgcagtgagagtgagtgtgccTGCTCGGGGTCTTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66694 True 355 lncRNA 0.47 1 13860255 13860609

Neighbor

gene id symbol gene type direction distance location
ptmaa NA coding upstream 2355 13854242 ~ 13857900 (+)
phb2b phb2b,LOC107692360,LOC107591156,LOC108427714 coding upstream 36463 13820119 ~ 13823792 (+)
pde6d pde6d,LOC107590678,LOC107591155 coding upstream 40336 13813916 ~ 13819919 (+)
usp13 usp13,LOC107659032 coding upstream 137821 13697792 ~ 13722434 (+)
ndufb5 LOC107659010,LOC107709185,LOC107590679,LOC107578042 coding upstream 163466 13693377 ~ 13696789 (+)
dlg1a dlg1,LOC107659037,LOC107738730,LOC108427717,LOC108271975 coding downstream 7268 13867877 ~ 13971903 (+)
lrrc40 lrrc40,LOC107709203,LOC107590628 coding downstream 120616 13981225 ~ 13985829 (+)
shroom2a LOC107659040,LOC107738857,LOC107591159,LOC107692366,LOC107590625 coding downstream 219019 14079628 ~ 14116522 (+)
trnag-ucc_2 NA coding downstream 220324 14080933 ~ 14081004 (+)
cldn34a cldn34,cldn34a,LOC107659013,LOC107709183,LOC107590626,LOC107692425,LOC107591192 coding downstream 257182 14117791 ~ 14121182 (+)
G45056 NA non-coding upstream 23436 13836607 ~ 13836819 (+)
G44998 LOC102783117 non-coding upstream 198158 13661812 ~ 13662097 (+)
LOC122346715 NA non-coding upstream 202489 13656192 ~ 13657766 (+)
G44997 bivm,LOC107732014,LOC107659026,LOC107548643,LOC107731835,LOC107692346 non-coding upstream 209372 13650115 ~ 13650883 (+)
LOC122346508 NA non-coding upstream 265654 13589885 ~ 13594601 (+)
G45075 lrrc7,LOC107659039,LOC107709201 non-coding downstream 132136 13992745 ~ 13996966 (+)
G45084 LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 non-coding downstream 155826 14016435 ~ 14128344 (+)
LOC122347615 NA non-coding downstream 268738 14129347 ~ 14131078 (+)
G45112 NA non-coding downstream 353602 14214211 ~ 14215282 (+)
G45095 pde4b,LOC107659050 non-coding downstream 402992 14263601 ~ 14286676 (+)
G44887 NA other upstream 450343 13394229 ~ 13409912 (+)
G44645 NA other upstream 750889 13108735 ~ 13109366 (+)
smx5 lsm2,LSM2,smx5 other upstream 778136 13080565 ~ 13082119 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 1054555 12765821 ~ 12805700 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other upstream 1333298 12521773 ~ 12526957 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other downstream 111564 13972173 ~ 13980286 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 1375556 15236165 ~ 15244280 (+)
G45419 sgip1,sgip1a,LOC107739126 other downstream 1498252 15358861 ~ 15459386 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other downstream 1704372 15564981 ~ 15566668 (+)
G45894 NA other downstream 3326099 17186708 ~ 17187308 (+)

Expression


Co-expression Network