G45257 (ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163)


Basic Information

Item Value
gene id G45257
gene name ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 14160475 ~ 14193166 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU66983
AATCAAGTGCACGGTTGTACAACATCAGCGCAGATGTCAGTCTCTCCTGTAAATCTTCTTCCCTCTCCAGCTCGACATCGTGAGGATGTGCGTAAGCCTGTTCAGCCAAGCACCGTGCTACCCTGAGCCTGCATTCTGTCTGGTTCTCCCCCATCTCTGGGCCCATAAGGGCAGCCACGCGCTCCACGCACTCCCCCTCCTCCAGCTCACGACCCAGGCGTTCATAGACGTAACCCAGGTTGGCCCAGGCGTTGAGGTTTTCTGGATCCTCTTGGCAGATGCTGCGGAAGGCCTCCTCTGCTGTCTCCAGTTCGTCTACATGAAAGGCCAGCAGGCCCAGCATATTGCGCACAGCGTACTGGAGTCTCCCCGTCTCCGCTTCGAGCTCAGCCCTGAGGCTCTCGCGCTTCAGCTGGGTGTCCCGGTGCCGAAGGGTGACTGGTCCGTTGGGTTCACCGTTCAGATTGAGCTCCAAATGAAAGTGGCCAGGGATGTAGGCCATCCCCTCAATCAGAGTCTCGATGTCCTCCTCTGTctctctctctctctg

Function

symbol description
ttc22 Orthologous to human TTC22 (tetratricopeptide repeat domain 22).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66983 True 550 TUCP 0.58 2 14160475 14193166

Neighbor

gene id symbol gene type direction distance location
cldn33b LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 coding downstream 32158 14126574 ~ 14128317 (-)
lrrc7 lrrc7,LOC107709201,LOC107692363,LOC107739104 coding downstream 120312 13986047 ~ 14040163 (-)
mrpl47 LOC107659009,LOC107732024,LOC107590634,LOC107709209,LOC107692352,LOC107548661 coding downstream 467649 13691026 ~ 13692826 (-)
nme7 nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107548663 coding downstream 521530 13607516 ~ 13638945 (-)
dpt dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436 coding downstream 575107 13578792 ~ 13585368 (-)
ttc4 ttc4,LOC107659046,LOC107738930,LOC107709194,LOC107692369 coding upstream 4526 14197692 ~ 14200743 (-)
pde4ba pde4b,pde4ba,LOC107659050,LOC107692372,LOC108443455,LOC107591166,LOC105913193 coding upstream 92331 14285497 ~ 14402960 (-)
lepr LOC107709190,LOC107738956,LOC107692373,LOC107591169,LOC107659051 coding upstream 221643 14414809 ~ 14450272 (-)
dnajc6 dnajc6,LOC107659052,LOC107692374,LOC107591170,LOC107590617 coding upstream 265823 14458989 ~ 14485480 (-)
ak4 ak4,LOC107590615,LOC107659053,LOC107692375,LOC107591174 coding upstream 292440 14485606 ~ 14492466 (-)
G45225 lrrc40,LOC107590628,LOC107709203 non-coding downstream 178590 13981229 ~ 13981885 (-)
G45206 NA non-coding downstream 188381 13911684 ~ 13972094 (-)
G45198 NA non-coding downstream 299030 13861235 ~ 13861445 (-)
G45197 NA non-coding downstream 299657 13860250 ~ 13860818 (-)
G45195 NA non-coding downstream 302358 13853897 ~ 13858117 (-)
G45270 LOC107692440 non-coding upstream 18200 14211366 ~ 14212986 (-)
G45271 sgip1,sgip1a,LOC107739126 non-coding upstream 21472 14214638 ~ 14216276 (-)
LOC122346673 NA non-coding upstream 70623 14263789 ~ 14279029 (-)
G45277 NA non-coding upstream 299955 14493121 ~ 14494022 (-)
LOC122346442 NA non-coding upstream 458550 14651716 ~ 14656031 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 374572 13718202 ~ 13785903 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 479181 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 1262757 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 3091009 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 3175343 10948692 ~ 10985132 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1134417 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 1295952 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 1342220 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other upstream 1410744 15603910 ~ 15605470 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other upstream 1563143 15756309 ~ 15765107 (-)

Expression


Co-expression Network