G45421


Basic Information

Item Value
gene id G45421
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15486374 ~ 15487892 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67246
agcttacAGACACTGAACATTTACTCtcctgactggttttgtggctcCGGCTCACACGACTCCAAACCTCTGAACGGTCTAAACTGCCTATACCAGTTACCAGTAAATGAATCGCTTCTCTTAATTTCCCGTTCTCCCTCTGTGTTCAGGTGTGGGTCTCTGCTGGCCCGTTTCCAGCTGACGGAGGGTCCCAGTAAACCGGCTCGTGGCGTGCAGTTCACCAGTGAGGCAGCACTCTGTCAGGCTGTGACATTGAGCTGGCTGGCCTCGGGTATCGATTTTCCTCATCAAAAGAGGTTTGCAGCAGGAAAATACATGGCGGACAACTAAACGACCTGACGCCAGTCTGCATATTTTGGACCAATTCTGAGTATTTAAAACACAGGACATGACCCCTACCTGACCTTATGGATAAACCTTTGTAGATGTACAATACAGGtggacctcacacacacacacactccagcagtATTATATGAGTTGCATTATAAAATGTGGACCGTTTTAGGGTGTACTTCTTATATTTGTGAACCGTACTCACTTTGCAACATCTGTATTGCGGCCTGGGTTTGTTCGTAAGGTTTAGCCTCTATTTCTGTCCGCCGTGTTATTGGCTGTGCCTACCTGAACCTGAAATCTCTGTATCCTTCTCTCGGAGCGATActgatgtgatgttttttattactCTATGCATTCAGTTTGTCAAAAGTATCACATTTTCGAGCAAGGTAGCAAATTAGTACGGTCAAAAAGAGGAAATGAGCCTCCGCCACAAGATGGCGCTATACTGTGCATGTAGTATGAGGTCTGCATCAGATTTTGGTGTTGCTcaagcttatttaaaaaaaaaaaaaaaaaaaaaaaagcgtattCAGGAATATCTCCTTTTAATTCACACAGCGCAGTCAGGTGCGTTAATTGGACAAGGATGCAAATTTTGTCGAATCCGTTTTTAGACGAGCGCCGCTTGAAAAATAGACTCCTGCTTGCAATAGACTCACAAAAGAACGGAAAAgtcgtaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaggccgtttggtgtttttttgtattgttaaatAGCCTTTCTGTTGTTCCAGGAAGGAACGTGTTAGACATCAGAGTACatcattctatttttatttattcacgatttgttgtatatatatataaaaaaatacgaAACATTACACTGTATATGAATAGACTTTGAATGGTATCATAATTTAGGATCCTTGAAGTTTTGGACTTTTTGTTATCTGTGTAGTTGGGTGAGCTGTGTACAGTATAATGCTGaggtataatttttaaattgatttcagatataatttttttaactcgAGCGAAAAGAAAATTTATGCTATATATGGGTCGGG
>TU67247
agcttacAGACACTGAACATTTACTCtcctgactggttttgtggctcCGGCTCACACGACTCCAAACCTCTGAACGGTCTAAACTGCCTATACCAGTTACCAGTAAATGAATCGCTTCTCTTAATTTCCCGTTCTCCCTCTGTGTTCAGGTGTGGGTCTCTGCTGGCCCGTTTCCAGCTGACGGAGGGTCCCAGTAAACCGGCTCGTGGCGTGCAGTTCACCAGTGAGGCAGCACTCTGTCAGGCTGTGACATTGAGCTGGCTGGCCTCGGGTATCGATTTTCCTCATCAAAAGAGGTTTGCAGCAGGAAAATACATGGCGGACAACTAAACGACCTGACGCCAGTCTGCATATTTTGGACCAATTCTGAGTATTTAAAACACAGGACATGACCCCTACCTGACCTTATGGATAAACCTTTGTAGATGTACAATACAGGtggacctcacacacacacacactccagcagtATTATATGAGTTGCATTATAAAATGTGGACCGTTTTAGGGTGTACTTCTTATATTTGTGAACCGTACTCACTTTGCAACATCTGTATTGCGGCCTGGGTTTGTTCGTAAGGTTTAGCCTCTATTTCTGTCCGCCGTGTTATTGGCTGTGCCTACCTGAACCTGAAATCTCTGTATCCTTCTCTCGGAGCGATActgatgtgatgttttttattactCTATGCATTCAGTTTGTCAAAAGTATCACATTTTCGAGCAAGGTAGCAAATTAGTACGGTCAAAAAGAGGAAATGAGCCTCCGCCACAAGATGGCGCTATACTGTGCATGTAGTATGAGGTCTGCATCAGATTTTGGTGTTGCTcaagcttatttaaaaaaaaaaaaaaaaaaaaaaaagcgtattCAGGAATATCTCCTTTTAATTCACACAGCGCAGTCAGGTGCGTTAATTGGACAAGGATGCAAATTTTGTCGAATCCGTTTTTAGACGAGCGCCGCTTGAAAAATAGACTCCTGCTTGCAATAGACTCACAAAAGAACGGAAAAgtcgtaatatatatatatatatatatatatatataaggccgtttggtgtttttttgtattgttaaatAGCCTTTCTGTTGTTCCAGGAAGGAACGTGTTAGACATCAGAGTACatcattctatttttatttattcacgatttgttgtatatatatataaaaaaatacgaAACATTACACTGTATATGAATAGACTTTGAATGGTATCATAATTTAGGATCCTTGAAGTTTTGGACTTTTTGTTATCTGTGTAGTTGGGTGAGCTGTGTACAGTATAATGCTGaggtataatttttaaattgatttcagatataatttttttaactcgAGCGAAAAGAAAATTTATGCTATATATGGGTCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67246 True 1415 lncRNA 0.39 2 15486374 15487892
TU67247 False 1377 lncRNA 0.40 3 15486374 15487892

Neighbor

gene id symbol gene type direction distance location
LOC122346435 wdr78,LOC107590676 coding upstream 146238 15334030 ~ 15340136 (+)
ghrhrb ghrhrb,LOC107704523,LOC107692395,LOC107556991,LOC107731650,LOC107717144 coding upstream 301708 15162993 ~ 15184666 (+)
cyldl LOC107556989,LOC107731632,LOC107704521,LOC107692392,LOC107717142,LOC107594643 coding upstream 331752 15148130 ~ 15154622 (+)
kank4 kank4,LOC107731645,LOC107704518,LOC107717130,LOC107692389,LOC107556542,LOC107591186 coding upstream 478305 14964912 ~ 15008069 (+)
dock7 dock7,LOC107591182 coding upstream 529171 14915866 ~ 14957203 (+)
pfkfb4b pfkfb4b,LOC107711047,LOC107673509,LOC107748389,LOC107585116,LOC108440764,LOC103024058 coding downstream 158128 15646020 ~ 15657188 (+)
LOC122347276 sumf1,LOC107673603,LOC107585117,LOC107667304 coding downstream 195674 15683566 ~ 15691034 (+)
LOC122347482 tsfm,LOC107711018,LOC107585120 coding downstream 207734 15695626 ~ 15697839 (+)
LOC122346397 pomgnt1,LOC107675946,LOC107692396 coding downstream 258182 15746074 ~ 15753735 (+)
LOC122347155 pik3r3,LOC107594617,LOC107717145,LOC107692397,LOC106584012,LOC107731623,LOC107556985 coding downstream 326030 15813922 ~ 15941551 (+)
LOC122346981 NA non-coding upstream 23954 15461962 ~ 15462420 (+)
G45400 NA non-coding upstream 141960 15275615 ~ 15344414 (+)
LOC122347324 NA non-coding upstream 253320 15231824 ~ 15233054 (+)
LOC122347325 NA non-coding upstream 254628 15230821 ~ 15231746 (+)
G45371 NA non-coding upstream 371723 15099837 ~ 15114651 (+)
G45447 NA non-coding downstream 22848 15510740 ~ 15577035 (+)
G45456 NA non-coding downstream 92370 15580262 ~ 15583406 (+)
G45470 uroc1 non-coding downstream 150054 15637946 ~ 15638524 (+)
G45459 LOC107711016,LOC107673510,LOC107748416 non-coding downstream 156142 15644034 ~ 15645126 (+)
LOC122346530 NA non-coding downstream 316396 15804288 ~ 15805565 (+)
G45419 sgip1,sgip1a,LOC107739126 other upstream 26988 15358861 ~ 15459386 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other upstream 242094 15236165 ~ 15244280 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other upstream 1506088 13972173 ~ 13980286 (+)
G44887 NA other upstream 2076462 13394229 ~ 13409912 (+)
G44645 NA other upstream 2377008 13108735 ~ 13109366 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other downstream 77089 15564981 ~ 15566668 (+)
G45894 NA other downstream 1698816 17186708 ~ 17187308 (+)
G46022 NA other downstream 2507299 17995191 ~ 17996717 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other downstream 2668763 18156655 ~ 18166242 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other downstream 3089286 18577178 ~ 18616958 (+)

Expression


Co-expression Network