G45448 (LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692)


Basic Information

Item Value
gene id G45448
gene name LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15564981 ~ 15566668 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67277
TCGTGTATGACCTTCTGTTCTTCTTCCTGGTGATCATCATCGTGCTGAATCTGATCTTTGGCGTCATCATTGATACGTTTGCTGATCTGAGAAGCGAGAAGCAGAGGAAAGAGGAAATCCTCAAGACCACATGTTTCATCTGCGGTCTGGAGAGAGACAAGTTTGATAATAAAACAGTGACGTTAGAGGAGCACATCAAGGAAGAGCACAACCTGTGGCATTACCTGTACTTCATTGTGCTGGTGCGGGTCAAGGACTCCACTGAATACACAGGCCCTGAGAGCTATGTCGCTCAGATGATCAAGGAACACAATCTGGACTGGTTTCCACGTATGAGGGCCATGTCGCTGGTCAGCAGTGATGGTGAGGGTGAACAAAATGAACTGCGCAGTTTGCAGGAGAAACTAGAGTCCACAATGAGGCTGGTCTCCAACCTGACCAATCAACTCACAGAGCTCAAAGAGCAGATGACTGAGCAGAGGAAACACAAGCAGCGGATTGGTCTGCTGGGAAACCCTGCCCACCTCAACATCAACCCACAGCAGCCGGCGTGAGAGGTAGGGCCTGAGGTCTGTCTGACATAATGGAGCCTCATTCCAGCAGCTTTAAAACTATCTTGACATGGACACTTACATAGTCATGAGGTAATGTCTGGTCATGCTCGGACATGCACGCTCACTCA

Function

NR:

description
PREDICTED: inositol 1,4,5-trisphosphate receptor type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67277 True 682 TUCP 0.49 4 15564981 15566668

Neighbor

gene id symbol gene type direction distance location
LOC122346435 wdr78,LOC107590676 coding upstream 224845 15334030 ~ 15340136 (+)
ghrhrb ghrhrb,LOC107704523,LOC107692395,LOC107556991,LOC107731650,LOC107717144 coding upstream 380315 15162993 ~ 15184666 (+)
cyldl LOC107556989,LOC107731632,LOC107704521,LOC107692392,LOC107717142,LOC107594643 coding upstream 410359 15148130 ~ 15154622 (+)
kank4 kank4,LOC107731645,LOC107704518,LOC107717130,LOC107692389,LOC107556542,LOC107591186 coding upstream 556912 14964912 ~ 15008069 (+)
dock7 dock7,LOC107591182 coding upstream 607778 14915866 ~ 14957203 (+)
pfkfb4b pfkfb4b,LOC107711047,LOC107673509,LOC107748389,LOC107585116,LOC108440764,LOC103024058 coding downstream 79352 15646020 ~ 15657188 (+)
LOC122347276 sumf1,LOC107673603,LOC107585117,LOC107667304 coding downstream 116898 15683566 ~ 15691034 (+)
LOC122347482 tsfm,LOC107711018,LOC107585120 coding downstream 128958 15695626 ~ 15697839 (+)
LOC122346397 pomgnt1,LOC107675946,LOC107692396 coding downstream 179406 15746074 ~ 15753735 (+)
LOC122347155 pik3r3,LOC107594617,LOC107717145,LOC107692397,LOC106584012,LOC107731623,LOC107556985 coding downstream 247254 15813922 ~ 15941551 (+)
G45421 NA non-coding upstream 77089 15486374 ~ 15487892 (+)
LOC122346981 NA non-coding upstream 102561 15461962 ~ 15462420 (+)
G45400 NA non-coding upstream 220567 15275615 ~ 15344414 (+)
LOC122347324 NA non-coding upstream 331927 15231824 ~ 15233054 (+)
LOC122347325 NA non-coding upstream 333235 15230821 ~ 15231746 (+)
G45456 NA non-coding downstream 13594 15580262 ~ 15583406 (+)
G45470 uroc1 non-coding downstream 71278 15637946 ~ 15638524 (+)
G45459 LOC107711016,LOC107673510,LOC107748416 non-coding downstream 77366 15644034 ~ 15645126 (+)
LOC122346530 NA non-coding downstream 237620 15804288 ~ 15805565 (+)
G45635 NA non-coding downstream 322089 15888757 ~ 16117279 (+)
G45419 sgip1,sgip1a,LOC107739126 other upstream 105595 15358861 ~ 15459386 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other upstream 320701 15236165 ~ 15244280 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other upstream 1584695 13972173 ~ 13980286 (+)
G44887 NA other upstream 2155069 13394229 ~ 13409912 (+)
G44645 NA other upstream 2455615 13108735 ~ 13109366 (+)
G45894 NA other downstream 1620040 17186708 ~ 17187308 (+)
G46022 NA other downstream 2428523 17995191 ~ 17996717 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other downstream 2589987 18156655 ~ 18166242 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other downstream 3010510 18577178 ~ 18616958 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other downstream 3695916 19262584 ~ 19347629 (+)

Expression


Co-expression Network