G45532


Basic Information

Item Value
gene id G45532
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15102690 ~ 15154616 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67394
tcaagacatttattttttggttgatAGTTTTCACTGGAATTAAATCAAATagactaaaacaaataaattcaaatattttgacaGGTCATTTGTGACAGTGATTGTTACATACAGCATTGCTCACAGTGTTAGTCAGTAGCCAGAAAGCTTCATACAGGATCTCAAGAACCAATACAAACTCAAAATTACAATTGGAATTCTGCAAGTCATCAACTTCATGTTTTATAGAAATCTCTATCTTGTCAGCATTACATGTAAGCAAAAATTGTCTTGACTCCCTTTTCTGTTAATATGAATTAGGCAGCAAGCTACAGTAGGTcaagaaaacataaaatctcTCCCCATTCGGATAAGAAAAGAacacaatcatatatatatatatatattatattatatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67394 True 408 lncRNA 0.29 2 15102690 15154616

Neighbor

gene id symbol gene type direction distance location
mafaa mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633 coding downstream 16124 15082218 ~ 15086566 (-)
usp1 usp1,LOC107591200,LOC107731620 coding downstream 140118 14957029 ~ 14962572 (-)
angptl3 angptl3,LOC107704519,LOC107731634,LOC107556555,LOC107717137,LOC107692388,LOC107591184 coding downstream 173565 14924139 ~ 14929125 (-)
atg4c atg4c,LOC107704517,LOC107731653,LOC107556554,LOC107591181,LOC107692386 coding downstream 187695 14907367 ~ 14914995 (-)
foxd3 foxd3,LOC107717135,LOC107591180,LOC107731647,LOC107692383,LOC107704516 coding downstream 290066 14805304 ~ 14812624 (-)
adcyap1r1b adcyap1r1b,LOC107731652,LOC107717143,LOC107692394,LOC107594619 coding upstream 32546 15187162 ~ 15211981 (-)
LOC122346855 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634 coding upstream 91813 15246429 ~ 15256160 (-)
LOC122346434 pars2,LOC107659014,LOC107590619,LOC107591164,LOC107709182,LOC107738922,LOC107692369 coding upstream 176620 15331236 ~ 15333933 (-)
sgip1a sgip1,LOC107659047 coding upstream 190313 15344929 ~ 15394123 (-)
LOC122346414 uroc1 coding upstream 439747 15594363 ~ 15600846 (-)
G45355 NA non-coding downstream 196982 14905502 ~ 14905708 (-)
LOC122346442 NA non-coding downstream 446659 14651716 ~ 14656031 (-)
G45277 NA non-coding downstream 608668 14493121 ~ 14494022 (-)
LOC122346673 NA non-coding downstream 823661 14263789 ~ 14279029 (-)
G45271 sgip1,sgip1a,LOC107739126 non-coding downstream 886414 14214638 ~ 14216276 (-)
G45543 NA non-coding upstream 30536 15185152 ~ 15239640 (-)
G45544 LOC107731621,LOC107675939,LOC107556983 non-coding upstream 78651 15233267 ~ 15745536 (-)
G45560 NA non-coding upstream 164769 15319385 ~ 15320034 (-)
G45579 NA non-coding upstream 328290 15482906 ~ 15484967 (-)
G45554 NA non-coding upstream 332047 15486663 ~ 15489101 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other downstream 909524 14160475 ~ 14193166 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 1316787 13718202 ~ 13785903 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 1421396 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 2204972 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 4033224 11055035 ~ 11069466 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 172967 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 334502 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 380770 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other upstream 449294 15603910 ~ 15605470 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other upstream 601693 15756309 ~ 15765107 (-)

Expression


Co-expression Network