G45579


Basic Information

Item Value
gene id G45579
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15482906 ~ 15484967 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67480
TACATTGTAGTAAGTTGCTTGTGGTTTCTGCTCGGCCACCTTCTTTAAATGGGTCATCAGGTTTGGCATATTCACCCAGAACTCCTTTGAGTCAGGATTGGGCTGTGTGGTGTCAGCACAGTAACTGAGGGTTAGGAAGGACGTGTTCCAGACGACTGTAGTTGGTTATGCTGAAGGTTAGCACAGCAGGCGATGGGTTATTTGCAAAATGCCGTGTGATGCCCGCCGGGAAGGACAACACCATCTCTCCGGTGATCTTCACCACACACCTTAGAAAGTGACATtattatacacataaataagTAAAGGTCTGGCGTGTGAAACACTGTTAGAAACAGAGTGatcaataaaaagtaattcacgggggccattcacacagaacaagtttttttgtcctgtttaactGCAGCACGCTGCTTTTGGTGTAAACACATGCTTGACGGACACCTTGTGTGTTCTGAAAAAAGAGAGGAAACTTACAAGAAGTTCaacttcaaaaaaatgtattaattaatctCAAGACCTTGcgtttttgttcttgttttattccAGTGCCTGTTtctttcaaagcaaaaacattCTACATGAATGGCCCTACATACTGTAATAAGGGACATCAggacatagaaaaaaaacagatgtacAGACAGAAGAGATTAACAGAGGGAGGGACAGAGATGATGGGTAAATATACGTTTTCtcattaaaggaatggttcacccaaaaatgaaaataatgtcatcatttactcactctcaagtacttccaaacctgtatgaatatCTTTGTTCTGACGAACgcaaaaggaagatattttaaagaaagtttgtacccaggctgtatttttttctgctatggaagtcaatggtgaccaaaaacaGCCTGGGTACAAACTGTGTTTGAAatttcctcctttgtgttcagggtgaactattcctttaaggaccTCTCTGAAACATATAGGTcatatatttgtacattaatttaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67480 True 990 lncRNA 0.39 2 15482906 15484967

Neighbor

gene id symbol gene type direction distance location
sgip1a sgip1,LOC107659047 coding downstream 88783 15344929 ~ 15394123 (-)
LOC122346434 pars2,LOC107659014,LOC107590619,LOC107591164,LOC107709182,LOC107738922,LOC107692369 coding downstream 148973 15331236 ~ 15333933 (-)
LOC122346855 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634 coding downstream 226746 15246429 ~ 15256160 (-)
adcyap1r1b adcyap1r1b,LOC107731652,LOC107717143,LOC107692394,LOC107594619 coding downstream 270925 15187162 ~ 15211981 (-)
LOC122346528 LOC107731631,LOC107704508 coding downstream 334821 15144790 ~ 15148085 (-)
LOC122346414 uroc1 coding upstream 109396 15594363 ~ 15600846 (-)
LOC122346598 LOC107673517,LOC107711045,LOC107580698 coding upstream 116465 15601432 ~ 15603448 (-)
LOC122347277 endou coding upstream 206295 15691262 ~ 15695534 (-)
mast2 mast2,LOC107717134,LOC107692432 coding upstream 667179 16152146 ~ 16253840 (-)
tmem69 tmem69,LOC107731626,LOC107684288,LOC107725194,LOC107594642,LOC107692399,LOC107579605 coding upstream 769674 16254641 ~ 16256080 (-)
G45560 NA non-coding downstream 162872 15319385 ~ 15320034 (-)
G45543 NA non-coding downstream 243266 15185152 ~ 15239640 (-)
G45532 NA non-coding downstream 328290 15102690 ~ 15154616 (-)
G45355 NA non-coding downstream 577198 14905502 ~ 14905708 (-)
LOC122346442 NA non-coding downstream 826875 14651716 ~ 14656031 (-)
G45554 NA non-coding upstream 1696 15486663 ~ 15489101 (-)
LOC122347074 NA non-coding upstream 95617 15580584 ~ 15581055 (-)
LOC122347378 NA non-coding upstream 102539 15587506 ~ 15588222 (-)
LOC122347411 efcab12 non-coding upstream 106100 15591067 ~ 15592196 (-)
G45602 NA non-coding upstream 159102 15644069 ~ 15645396 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other downstream 152055 15327583 ~ 15330851 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other downstream 1289740 14160475 ~ 14193166 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 1697003 13718202 ~ 13785903 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 1801612 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 2585188 12525756 ~ 12897718 (-)
insl5a LOC107692440 other upstream 4151 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 50419 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other upstream 118943 15603910 ~ 15605470 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other upstream 271342 15756309 ~ 15765107 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other upstream 574001 16058968 ~ 16059767 (-)

Expression


Co-expression Network