G45602


Basic Information

Item Value
gene id G45602
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15644069 ~ 15645396 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67511
gtCATCTTTTACTCCCCCGAATGTTGTCCGAAGCCCAAACTTTCTACAgagcttaaaatgttttgaagaatgttgggaACCATACAACGTTGGAACACCAATTCTCcgaatatattttatgttccataaaagaaagtaaatcatgcagttttgtaaatgatcccagaaatgtaattttttaaacaaatatccATTTACAACACAAGTGCACTTTCAAGCAAAAAGTttcacaaaaatcaatttattcaaattctAAAACAATAGATACACTGACTCGTTTGTGAGAACCGGGAATAAGTGAAATTAGTTCGCAGAAGAGGTTATGCATTATATGGATTGATATCTTGTTTTACAAACTGTTATGAGTCACTGTTATTgtctttattatcattaatcattctttaaaaaatctatagttGTTCTGCAGAAAATTCTATAAATTGCTAAAGATATATTTCATGTGAAAGTGCTTCTGTAGACCACATCCCACAGTTACTGAGTCCTAGATGATGAAGAGAATGGTGGTTTTAAAGGTAGTCATCATAGCCAGACTGATCCTCGATGCCAGCTGCAAATATAGAAACATGACATAttccttaaaaagaaaactgagcTGAATTACATTTAGACCGAGGAGTTACCATTACAATGAAAAGCATGCTTCATTCCAGCTGAGTAGGGATCTGTAATCTACAACAAACACATTGagataACTGAACTTGGAGGGATCGCGGGGGCTTGGTAAGATGGAGGGGGTGGCACCCATGATGGAATGGGAATAGTGGAGTCCAGGTTTTGCACGCTAGCATTGCAATTCAGCTTCAACATGGCTATCCTGGCATGAATGGGGATAGGTGGAAGGGGCCCTTTCCTCTGAGCGAGCGACATAGACTCTTCACTAACGCTGGAGGGAGTCTGCGCCGAGTCATGTGATTGGCTGGACGTTGTGCTAGCAACTGTGGGTGTGTTCTCTGGAAGTGCCGCGTCCGAATCAAGATGTTGTGGAACTCTGGGTGAACTTCTGAGAGAAAGCCTATGGCCAGAATGAAAGcctcaaaaacacaaataatcagAACCCAACTAGCatacactgaaacaaaaaatactacTGTGGGTTTTACTTCTCaacattttcactcagaaattgcaaTAAATCTTGGTTGCCTCTCTATGGCTGTTTTGCTTCTCACCTCTTGTGCAATGCATTTCCTCTAAGACAATTGTCAAGTTTTTCTTTCCAGTCTGAAACACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67511 True 1253 lncRNA 0.39 2 15644069 15645396

Neighbor

gene id symbol gene type direction distance location
LOC122346598 LOC107673517,LOC107711045,LOC107580698 coding downstream 40621 15601432 ~ 15603448 (-)
LOC122346414 uroc1 coding downstream 43223 15594363 ~ 15600846 (-)
sgip1a sgip1,LOC107659047 coding downstream 249946 15344929 ~ 15394123 (-)
LOC122346434 pars2,LOC107659014,LOC107590619,LOC107591164,LOC107709182,LOC107738922,LOC107692369 coding downstream 310136 15331236 ~ 15333933 (-)
LOC122346855 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634 coding downstream 387909 15246429 ~ 15256160 (-)
LOC122347277 endou coding upstream 45866 15691262 ~ 15695534 (-)
mast2 mast2,LOC107717134,LOC107692432 coding upstream 506750 16152146 ~ 16253840 (-)
tmem69 tmem69,LOC107731626,LOC107684288,LOC107725194,LOC107594642,LOC107692399,LOC107579605 coding upstream 609245 16254641 ~ 16256080 (-)
LOC122347419 nasp,LOC107551040,LOC107725201,LOC107594614,LOC107731628 coding upstream 626621 16272017 ~ 16277301 (-)
akr1a1b akr1a1,akr1a1b,LOC107725198,LOC107692407,LOC107731642,LOC107684038 coding upstream 632461 16277857 ~ 16280917 (-)
LOC122347411 efcab12 non-coding downstream 51873 15591067 ~ 15592196 (-)
LOC122347378 NA non-coding downstream 55847 15587506 ~ 15588222 (-)
LOC122347074 NA non-coding downstream 63014 15580584 ~ 15581055 (-)
G45554 NA non-coding downstream 154968 15486663 ~ 15489101 (-)
G45579 NA non-coding downstream 159102 15482906 ~ 15484967 (-)
LOC122347156 NA non-coding upstream 197735 15843131 ~ 15877467 (-)
G45709 NA non-coding upstream 256820 15902216 ~ 16118586 (-)
G45751 NA non-coding upstream 621787 16267183 ~ 16267542 (-)
G45752 NA non-coding upstream 623519 16268915 ~ 16269392 (-)
G45753 NA non-coding upstream 625506 16270902 ~ 16271108 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other downstream 38599 15603910 ~ 15605470 (-)
insl5a LOC107692440 other downstream 153384 15489118 ~ 15490685 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other downstream 313218 15327583 ~ 15330851 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other downstream 1450903 14160475 ~ 14193166 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 1858166 13718202 ~ 13785903 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other upstream 110913 15756309 ~ 15765107 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other upstream 413572 16058968 ~ 16059767 (-)
G45731 LOC107692397,LOC107556985,LOC107717145,LOC106584012 other upstream 414497 16059893 ~ 16060466 (-)
fam183a fam183a,LOC107551015 other upstream 715771 16361167 ~ 16364020 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other upstream 1171244 16816640 ~ 16830261 (-)

Expression


Co-expression Network