G45635


Basic Information

Item Value
gene id G45635
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15888757 ~ 16117279 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67573
ttttattttctctGGGCTTATTTATGTTCACAGAGCTGATTATTGGAGTCCAGTATAGCACACATCATATTTGAATAGtttggagaaaacaaaaatgttttaatcactttttttgctgtttgttagCGTTTTCCCAGGCGTTGAGACCAAAGATTttagtttggtttgttttattttcttgggTAGTCCTAGTTTTGAAAAGATGCATAATTTTCTTCCCTTGTATTTCAATTGCCTTGCTTTCATGCAAACTTAATTTTGTGTCTTAGTTTCGGGTCACTATTGCTGACCCCTCACGTGTCTGGCAAAATAACAATGTCTCTTTTAATGTCCGTATATTGAAGGGTTCACTGTGGATTGGCTGGGGGtccatttttttgccatttaaaaaaaaaattatgacaatttGTTTACCGAAatgaaatgtagttttgttAAGCCTCAAATTGAACAGTCTGGCCTAAAGCTGATTCATTTTTGCACTCACTTGTTTGTAAAAGataaatgcttttgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgccatcaTAGTTATCCCTTGTCATTAATTTGTCCGTTAGGTCACTAAACCACCTCTAAAGTTACCAAAATCAAGTGTTTCTATGCCTCTTTTCTTTACAGAATAGTCTTGAGTTCACTCCAGCTGGAGTCATTGttgctttttctttcagttttgtcaaattcattaaagaaaacaGACAACCCTATACCACACAGAAATGTATGGTTTGTTTAGAAAGAGAAACGAAAAGTGATTGTCATTCTCTGCAGGGCAGAAAGCAGTAGGGTTTGTTAGTTTTCTTTGTTCCTATACTCAAGAAAGCATGaaatattctgtttttctttttccttctgaAAGTTTTCAGGGACATGAAAAGCATTGCATTGGGAATTCGTATGAGAGACATTTACtagagtgctttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67573 True 975 lncRNA 0.35 3 15888757 16117279

Neighbor

gene id symbol gene type direction distance location
LOC122346397 pomgnt1,LOC107675946,LOC107692396 coding upstream 135022 15746074 ~ 15753735 (+)
LOC122347482 tsfm,LOC107711018,LOC107585120 coding upstream 190918 15695626 ~ 15697839 (+)
LOC122347276 sumf1,LOC107673603,LOC107585117,LOC107667304 coding upstream 197723 15683566 ~ 15691034 (+)
pfkfb4b pfkfb4b,LOC107711047,LOC107673509,LOC107748389,LOC107585116,LOC108440764,LOC103024058 coding upstream 231569 15646020 ~ 15657188 (+)
LOC122346435 wdr78,LOC107590676 coding upstream 548621 15334030 ~ 15340136 (+)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 coding downstream 140004 16257283 ~ 16266980 (+)
ccdc17 LOC107684240,LOC107551021,LOC107731625,LOC107594632 coding downstream 149923 16267202 ~ 16271906 (+)
orc1 orc1,LOC107551039,LOC107594609 coding downstream 166949 16284228 ~ 16292059 (+)
c6h1orf210 LOC107724134,LOC107684305,LOC107692441,LOC107725196,LOC107594641,LOC107551026 coding downstream 203109 16320388 ~ 16325619 (+)
ap1m3 ap1m3,LOC107724146,LOC107684323,LOC107692442,LOC108441657,LOC103463064,LOC103355575,LOC104919037 coding downstream 208465 16325744 ~ 16338484 (+)
LOC122346530 NA non-coding upstream 83192 15804288 ~ 15805565 (+)
G45459 LOC107711016,LOC107673510,LOC107748416 non-coding upstream 243631 15644034 ~ 15645126 (+)
G45470 uroc1 non-coding upstream 250233 15637946 ~ 15638524 (+)
G45456 NA non-coding upstream 305351 15580262 ~ 15583406 (+)
G45447 NA non-coding upstream 311722 15510740 ~ 15577035 (+)
G45643 NA non-coding downstream 34903 16152182 ~ 16155761 (+)
G45684 NA non-coding downstream 178252 16295531 ~ 16298954 (+)
G45794 mier1,LOC107551013,LOC107758364,LOC107724131 non-coding downstream 446675 16563954 ~ 16565233 (+)
G45785 uap1,LOC107724142,LOC107551035 non-coding downstream 538419 16655698 ~ 16656620 (+)
G45815 LOC107551035,LOC107724142,LOC107692418 non-coding downstream 541400 16658679 ~ 16659687 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other upstream 322089 15564981 ~ 15566668 (+)
G45419 sgip1,sgip1a,LOC107739126 other upstream 429371 15358861 ~ 15459386 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other upstream 644477 15236165 ~ 15244280 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other upstream 1908471 13972173 ~ 13980286 (+)
G44887 NA other upstream 2478845 13394229 ~ 13409912 (+)
G45894 NA other downstream 1069429 17186708 ~ 17187308 (+)
G46022 NA other downstream 1877912 17995191 ~ 17996717 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other downstream 2039376 18156655 ~ 18166242 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other downstream 2459899 18577178 ~ 18616958 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other downstream 3145305 19262584 ~ 19347629 (+)

Expression


Co-expression Network