G45709


Basic Information

Item Value
gene id G45709
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15902216 ~ 16118586 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67663
ttgaacaaaatattttctttattctgcAAGAGAACTGAATATCGTGGAGTTCCATTGATTATATACATGAGTTCACCTCATAACAAATGGAGAGTCTACAACCAATACAAACTATTGTAACAGATACAAGAAAATGTTGTTGTGGAAACCGAAGAATACCGATAAGTCTGAAGCAACAACGATACTCAAATACTGAGAGAGAGGATTTCTGACGTCTCTTGTTCTCTACATGCAGAGCTAAATTATCTCACGTCCTTTTGTGCCATAACTTTTCTAATAAGACATGAAACAACTGTTTTACAGAAGCATAAATGGACCAGAGCCGTGCAACACGTTTATTTTCATTGCAATATGTCGTTTTTTTTGGACATTGAGAACCCGTGGCTTATTGCTCAAGCTGAGTCTATAAAAGTCCAGAGATGAATGCACTGCTGGTGTTAAGGGAATATTTAGATTTACGCAGAATAAAAGTGAGCATTCAGTCAATACGATGATCCGAGTATGAAGAAAAGACATTAGTTGAAAGGTCTCAGATGAGATACATGTATACGTTACTGAGTCGGTTGTGCAAGCGGTATTGAACACGCTGTTGTCTATTGCTTCAGCTCCTCTGTCTCAGTTTTTGTGAACATCATTTCGCTTTTAGTCACTGCAACAAAGGGCTCCAACTTATTTCAGCTGAAAAAGCAGACTTTTTTCATAAgctatattaaaatttatatttgacTACACCATAAACAGACAATTAACAGTATTTGttcaacatcttttttttttcagttttacttttttttttgtttgtttgtttttattacacaaaacAACAGTCAAGAGTACCAAAGAAGCATGCTGGGTTTTACGTATGTCAAAGTGGGAAGGAGAGTGatagtttggggtttttttttgtttttttttttttttttgttgttgttgttgttgttggtatgttttttttttgttcagaaacTGTTCCTCCCTCCCATgagtgtagttttttttttaattttggggggCGAGTCTTCATCTCCGAGGGCCTGAGGGCATCTGTGCATACACTGGGTACGCCAGCCGCACGTTGAGCGAGTCGTTGTGCTGGACCAGTGAGGTCTGGTGGTAGTGCAGGACCAAGTCTTTCAGAGTGCTGTACAAGTTGTAGGGCTCGGCGAAACCGTAGCCGCGGGGTGTGCTGTAGATGACGCAGTGCTTCACCTCGCCGTC
>TU67664
ttgaacaaaatattttctttattctgcAAGAGAACTGAATATCGTGGAGTTCCATTGATTATATACATGAGTTCACCTCATAACAAATGGAGAGTCTACAACCAATACAAACTATTGTAACAGATACAAGAAAATGTTGTTGTGGAAACCGAAGAATACCGATAAGTCTGAAGCAACAACGATACTCAAATACTGAGAGAGAGGATTTCTGACGTCTCTTGTTCTCTACATGCAGAGCTAAATTATCTCACGTCCTTTTGTGCCATAACTTTTCTAATAAGACATGAAACAACTGTTTTACAGAAGCATAAATGGACCAGAGCCGTGCAACACGTTTATTTTCATTGCAATATGTCGTTTTTTTTGGACATTGAGAACCCGTGGCTTATTGCTCAAGCTGAGTCTATAAAAGTCCAGAGATGAATGCACTGCTGGTGTTAAGGGAATATTTAGATTTACGCAGAATAAAAGTGAGCATTCAGTCAATACGATGATCCGAGTATGAAGAAAAGACATTAGTTGAAAGGTCTCAGATGAGATACATGTATACGTTACTGAGTCGGTTGTGCAAGCGGTATTGAACACGCTGTTGTCTATTGCTTCAGCTCCTCTGTCTCAGTTTTTGTGAACATCATTTCGCTTTTAGTCACTGCAACAAAGGGCTCCAACTTATTTCAGCTGAAAAAGCAGACTTTTTTCATAAgctatattaaaatttatatttgacTACACCATAAACAGACAATTAACAGTATTTGttcaacatcttttttttttcagttttactttttttgtttgtttgttttgttttattacacaaACAACAGTCAAGAGTACCAAAGAAGCATGCTGGGTTTTACGTATGTCAAAGTGGGAAGGAGAGTGatagtttgggtttttttttttttttcctttttcttttttttgaaaaccttcgtttttttttgtattttttttttaatatgtaagaAATGTGCTGGATATCATGGTGGGACAGCTGTGGTAAGAACACAAAAGACTCCCAATGAGAATCACAACATATTCGAACCTGACTGCAAATAAAACTTTGCAGAACTGCACAAGGGGGCAATAGCCAGTGCTAGTTAACAGTCCGGAAATAACCTTAGCCAGGTCTTCTAGTCATAACACCTGCTTTGTACAGAGTCTAACTGAAAACTCAAGCGGTTACGAGTCAAGAAAGGTTGTTTTGGTACATGTCCAAACCTCTGAGCTTTTGAAGCAATGCACTGTTGATTCTGTCGGGCTTGTTATAATGTGTGCGCTTCCCCCATTCCCacttcaatacaaaaaaaaaaaaaaagcactctaGTAAATGTCTCTCATACGAATTCCCAATGCAATGCTTTTCATGTCCCTGAAAACTTtcagaaggaaaaagaaaaacagaatatttCATGCTTTCTTGAGTATAGGAACAAAGAAAACTAACAAACCCTACTGCTTTCTGCCCTGCAGAGAATGACAATCACTTTTCGTTTCTCTTTCTAAACAAACCATACATTTCTGTGTGGTATAGGGTTGTCtgttttctttaatgaatttgacaaaactgaaagaaaaagcaaCAATGACTCCAGCTGGAGTGAACTCAAGACTATTCTGTAAAGAAAAGAGGCATAGAAACACTTGATTTTGGTAACTTTAGAGGTGGTTTAGTGACCTAACGGACAAATTAATGACAAGGGATAACTAtgatggcacacacacacacacacacacacacacacacacacgcacacacaaaagcatttatCTTTTACAAACAAGTGAGTGCAAAATGAATCAGCTTTAGGCCAGACTGTTCAATTTGAGGCTTaacaaaactacatttcatTTCGGTAAACaaattgtcataatttttttttaaatggcaaaaaaatggaCCCCAGCCAATCCACAGTGAACCCTTCAATATACGGACAGTAAAAGAGACATTGTTATTTTGCCAGACACGTGAGGGGTCAGCAATAGTGACCCGAAACTAAGACACAAAATTAAGTTTGCATGAAAGCAAGGCAATTGAAATACAAGGGAAGAAAATTATGCATCTTTTCAAAACTAGGACTAcccaagaaaataaaacaaaccaaactaaAATCTTTGGTCTCAACGCCTGGGAAAACGctaacaaacagcaaaaaaagtgattaaaacatttttgttttctccaaaCTATTCAAATATGATGTGTGCTATACTGGACTCCAATAATCAGCTCTGTGAACATAAATAAGCCCCTTTACtttcaacaaaacacacaagttCGGTTCCAGTCTGAAGAGTAAACATGTTCAGGCATGTTTTATACTCAATCCATTCATGTCATAAAAGGGATTTcctgtgttttaataaatgtatctatgtattattaaaagacATTCAATGGTGAGTGATGCAAGAGTTCAAGTAATAGACAGGGAGCCCCTCTGGGGCCCagcttcaaaaaagaaaagaaaatctaaaacaaacaaaacacgaATATCTGCAACTCAAAATATATGAAGgatagaataaaatgaaattaaagctGAACCTATGATATTGAAcatagaaaccaaaaaaaggcAACACCAAGGCTGCAAAGACGCATTTCTGAACGGTCGGACACAGAACTAAAATCAAGCAGCTGATCTGCTGAGGCGAGCGTGTTCTGGTCGTGCCACAGCGATGCTAGAGCAGACAAGACAAGAACGCTGAGTTCTGCCAGTTACACCCAATCAAACCCAACAAAACCACAACCACTTGCAATAGCAAATGGGAGAGCAGCTGAAAAGAGCAATGGATGGGAAAAATCTCCATCAGTTTCCTTGTCTGCATGTGGTTTTCATTCGGACTCTAAGGTTGTAAGTTCATCTCAACATCTGATCTGACTGAATGCTCTCTCTGTTTCCAAACTAACCACCAACCATCcagcaaaaaaaattccaattGTGCAGATCACTTCAGAAGCAATTAAAAACTACCTCATGAAAAATTAACTATTTTACGATTTGGCAATCGTTttgattcatataaaaaaaatttccaccCCAACCTAAACAAACTCTACAATTGTTTGAATTTTCCAATTtgccaaaacataaaatagtgtTTTGACAAATGTTCTGAACTGACTATATGCTGTGCGCTGAGTGAGATGGTAGTGGTGGGTGAGAGCCGTCTGTCCTGTTTAATGACCTGTAAGACTAACAGTTTTTCTCAGTATACAACTTAATTGTAAAAAGGGGAAACTGtgagagaaaatgaaataacagtGTGAACTTCAAGACTAAACTGGACACCTGCGTGTCAGAAGCCCaacaaaaacaggaagtgatATAACTGACGTACCGACAGTAAATATTGTGCATATAGCtttgaatattttcataaaGGTTTTATTGTGCGACATTAAAACCAACAGGCAGCCaaacaataaagtgtaatatCTCTTTTCTGATACAGAATGAGTCAACCTGCTAAAGAGAGAAGCACTAGGCAATAaaggggctttttttttttttttttttttttaaaagaaactctTCAAAAGGTTCAAGTGATTATCGCTTTTTGATGCAGTTTGTTTATCTCTCTGACAGACCACTTCTCTACCATCAAAAGCTggattgcactttatttttaagataccTACTAAAGCACATCTGCTCTAACACTGCTCTTACCGAAGAACTTCTTCTGAACGTGTTTGACAAGTACACGAATCCAATTAAGCATCAAGATGCCacattagttaatttttttgattttggtgCAGCGgtcagttgttatttttatataagtgCTTTATGTCAACTGTGTCTGTGCATGCGATTTTGGTTCTTATGAAAAATGTGGAGCTTCTGTTCACAGTACACAGATCCAAACTATTTTAAGTAGTTTGCAAACTAGGTGTATTAAGTATAATTTCGCTCAATTAATACAAGCCAATTTTAatcattagtaaaaaaaaaaaaaaaaaaaaaaaaaagtcctcccCATGCCAACTTTGGTCTCTGCACTGAGCTGTAGCGATCTTAACTGCTTAGGAAAGGACAAAACTTTTGATCCAGCCAAACTGAAAACAaggacaagacaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaagcgctaaAATGGAGCATGTAAAAAGTCCCAGCTGGAGTTTAGGTAGCAGCGCGGGTCACCTGAAACTCGCCTCCTCTGCTTCCTTCTGCTTTTTTcacattcacaaacatttaaaacttcCTTGTGCAAATCAAGCAGTCTTAGAAAGAATGCCCTCCAAATTGTtcttgtaaaaaatatatactccAAGGTGGCTGACGTGTGTGTTgcagcaagtgtttttttttttttttttgttgttgttgttgttgttggtatgttttttttttgttcagaaacTGTTCCTCCCTCCCATgagtgtagttttttttttaattttggggggCGAGTCTTCATCTCCGAGGGCCTGAGGGCATCTGTGCATACACTGGGTACGCCAGCCGCACGTTGAGCGAGTCGTTGTGCTGGACCAGTGAGGTCTGGTGGTAGTGCAGGACCAAGTCTTTCAGAGTGCTGTACAAGTTGTAGGGCTCGGCGAAACCGTAGCCGCGGGGTGTGCTGTAGATGACGCAGTGCTTCACCTCGCCGTC
>TU67665
aaaatattttctttattctgcAAGAGAACTGAATATCGTGGAGTTCCATTGATTATATACATGAGTTCACCTCATAACAAATGGAGAGTCTACAACCAATACAAACTATTGTAACAGATACAAGAAAATGTTGTTGTGGAAACCGAAGAATACCGATAAGTCTGAAGCAACAACGATACTCAAATACTGAGAGAGAGATTTCTGACGTCTCTTGTTCTCTACATGCAGAGCTAAATTATCTCACGTCCTTTTGTGCCATAACTTTTCTAATAAGACATGAAACAACTGTTTTACAGAAGCATAAATGGACCAGAGCCGGTGCAACACGTTTATTTTCATTGCAATATGTCGTTTTTTTTGGACATTGAGAACCCGTGGCTTATTGCTCAAGCTGAGTCTATAAAAGTCCAGAGATGAATGCACTGCTGGTGTTAAGGGAATATTTAGATTTACGCAGAATAAAAGTGAGCATTCAGTCAATACGATGATCCGAGTATGAAGAAAAGACATTAGTTGAAAGGTCTCAGATGAGATACATGTATACGTTACTGAGTCGGTTGTGCAAACGGTATTGAACACGCTGTTGTCTATTGCTTCAGCTCCTCTGTCTCAGTTTTTGTGAACATCATTTCGCTTTTAGTCACTGCAACAAAGGGCTCCAACTTATTTCAGCTGAAAAAGCAGACTTTTTTCATAAgctatattaaaatttatatttgacTACACCATAAACAGACAATTAACAGTATTTGttcaacatctttttttttttttttcagttttacttttttttttgtttttttgttttttattaa
>TU67666
ttgaacaaaatattttctttattctgcAAGAGAACTGAATATCGTGGAGTTCCATTGATTATATACATGAGTTCACCTCATAACAAATGGAGAGTCTACAACCAATACAAACTATTGTAACAGATACAAGAAAATGTTGTTGTGGAAACCGAAGAATACCGATAAGTCTGAAGCAACAACGATACTCAAATACTGAGAGAGAGGATTTCTGACGTCTCTTGTTCTCTACATGCAGAGCTAAATTATCTCACGTCCTTTTGTGCCATAACTTTTCTAATAAGACATGAAACAACTGTTTTACAGAAGCATAAATGGACCAGAGCCGTGCAACACGTTTATTTTCATTGCAATATGTCGTTTTTTTTGtttttttttttttttttttttttttttttttttttgttactaatGATTAAAATTGGCTTGTATTAATTGAGCGAAATTATACTTAATTACACCTAGTTTGCAAACTACTTAAAATAGTTTGATCTGTGTACTGTGAACAGAAGCTCC

Function

GO:

id name namespace
GO:0007420 brain development biological_process
GO:0060322 head development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67663 False 1218 lncRNA 0.39 3 15941258 16118586
TU67664 True 4659 lncRNA 0.37 4 15941258 16118586
TU67665 False 815 lncRNA 0.34 2 15902216 15946255
TU67666 False 513 lncRNA 0.32 2 16058245 16118586

Neighbor

gene id symbol gene type direction distance location
LOC122347277 endou coding downstream 206682 15691262 ~ 15695534 (-)
LOC122346598 LOC107673517,LOC107711045,LOC107580698 coding downstream 298768 15601432 ~ 15603448 (-)
LOC122346414 uroc1 coding downstream 301370 15594363 ~ 15600846 (-)
sgip1a sgip1,LOC107659047 coding downstream 508093 15344929 ~ 15394123 (-)
LOC122346434 pars2,LOC107659014,LOC107590619,LOC107591164,LOC107709182,LOC107738922,LOC107692369 coding downstream 568283 15331236 ~ 15333933 (-)
mast2 mast2,LOC107717134,LOC107692432 coding upstream 33560 16152146 ~ 16253840 (-)
tmem69 tmem69,LOC107731626,LOC107684288,LOC107725194,LOC107594642,LOC107692399,LOC107579605 coding upstream 136055 16254641 ~ 16256080 (-)
LOC122347419 nasp,LOC107551040,LOC107725201,LOC107594614,LOC107731628 coding upstream 153431 16272017 ~ 16277301 (-)
akr1a1b akr1a1,akr1a1b,LOC107725198,LOC107692407,LOC107731642,LOC107684038 coding upstream 159271 16277857 ~ 16280917 (-)
prpf38a prpf38a,LOC107731643,LOC107725199,LOC107692408,LOC107684051 coding upstream 162803 16281389 ~ 16284146 (-)
LOC122347156 NA non-coding downstream 24749 15843131 ~ 15877467 (-)
G45544 LOC107731621,LOC107675939,LOC107556983 non-coding downstream 156680 15233267 ~ 15745536 (-)
G45602 NA non-coding downstream 256820 15644069 ~ 15645396 (-)
LOC122347411 efcab12 non-coding downstream 310020 15591067 ~ 15592196 (-)
LOC122347378 NA non-coding downstream 313994 15587506 ~ 15588222 (-)
G45751 NA non-coding upstream 148597 16267183 ~ 16267542 (-)
G45752 NA non-coding upstream 150329 16268915 ~ 16269392 (-)
G45753 NA non-coding upstream 152316 16270902 ~ 16271108 (-)
G45770 NA non-coding upstream 201827 16320413 ~ 16322805 (-)
G45897 NA non-coding upstream 1068870 17187456 ~ 17187794 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other downstream 137109 15756309 ~ 15765107 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other downstream 216731 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other downstream 296746 15603910 ~ 15605470 (-)
insl5a LOC107692440 other downstream 411531 15489118 ~ 15490685 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other downstream 571365 15327583 ~ 15330851 (-)
fam183a fam183a,LOC107551015 other upstream 242581 16361167 ~ 16364020 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other upstream 698054 16816640 ~ 16830261 (-)
G45895 NA other upstream 1068103 17186689 ~ 17187318 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other upstream 1117204 17235790 ~ 17246386 (-)
G45910 NA other upstream 1189229 17307815 ~ 17308478 (-)

Expression


Co-expression Network