G45894


Basic Information

Item Value
gene id G45894
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 17186708 ~ 17187308 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU67943
ggctaacgggacggctgggcggaaccagcgggcttactgggtagctgaacgggaacaggaactcaggatacaggggaggtgcccagtctaagtccaagtccaagtctacatcatccagctccctttgcagatccagcagccccaggtggatgatcagctcatcctcagccgatgtgtagtgggcggagctccactccgcgctctcctcgcagtcggctgtctccaccgcggggagctccgttgctggctcgcgcacctggtctgacgtatacggctcgggtcctgttacgctccacggctctgtcgctctctgtgacgatgggtccgtggtcacgctcgactccgcccccgtgtcagcagtgggctcaggctggggctcgaccatgcggtgaagggatgagttgggctctggatctggagtggggctggtgtcgttgtcctcaggcgcaaccatcattgttgatttgcacgacaccagcacccactcgacgtatgcggcgaggctctctcgaggaccgctcccggacagctgcgcttggctggaggtgttaagtccacggaaatagagttcgagcagagagcagtccgggtagcgggagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67943 True 601 TUCP 0.62 1 17186708 17187308

Neighbor

gene id symbol gene type direction distance location
rgs4 rgs4,LOC107684221,LOC107711032,LOC107732436,LOC107551023,LOC107564089,LOC107685323 coding upstream 404575 16779272 ~ 16782133 (+)
uhmk1 uhmk1,LOC107692420,LOC107684193 coding upstream 518635 16660355 ~ 16668073 (+)
il12rb2 LOC107684120,LOC107724137,LOC107551010 coding upstream 582548 16593238 ~ 16604160 (+)
il23r LOC107724136,LOC107684101,LOC107692414 coding upstream 594964 16580538 ~ 16591744 (+)
lrp8 LOC107724141,LOC107684070,LOC107758363,LOC107692412 coding upstream 626593 16425419 ~ 16560115 (+)
rhcgl1 rhcgl1,LOC107722672,LOC107582811,LOC107685316,LOC107711010,LOC107667994,LOC107585195 coding downstream 298096 17485404 ~ 17489630 (+)
lrrc15 lrrc15,LOC107711115,LOC107585214 coding downstream 321048 17508356 ~ 17515931 (+)
LOC122346707 LOC107582740,LOC107685313,LOC107722678 coding downstream 327112 17514420 ~ 17517229 (+)
lnp1 LOC107585171,LOC107673618,LOC107711110,LOC107582738,LOC107685315,LOC107722679 coding downstream 591854 17779162 ~ 17786165 (+)
tmem45a tmem45a,LOC107673617,LOC107585212,LOC107582844,LOC107711111,LOC107685333,LOC107722675 coding downstream 599191 17786499 ~ 17791846 (+)
LOC122346379 NA non-coding upstream 225017 16838389 ~ 16961691 (+)
G45826 NA non-coding upstream 420421 16766065 ~ 16766287 (+)
G45817 nos1ap,LOC107594625 non-coding upstream 495647 16682741 ~ 16691061 (+)
LOC122346974 c6h1orf226,LOC107551033,LOC107684213,LOC107711121,LOC107594625,LOC107732445,LOC107692421 non-coding upstream 507615 16670364 ~ 16679093 (+)
G45815 LOC107551035,LOC107724142,LOC107692418 non-coding upstream 527021 16658679 ~ 16659687 (+)
G45896 NA non-coding downstream 110 17187418 ~ 17187804 (+)
G45903 NA non-coding downstream 50282 17237590 ~ 17239978 (+)
G45922 her6,LOC107680502,LOC107722674,LOC107711114,LOC107582845,LOC107685314 non-coding downstream 366209 17553517 ~ 17669007 (+)
G45962 LOC107585173,LOC107582739,LOC107711112 non-coding downstream 584846 17772154 ~ 17772733 (+)
G46020 NA non-coding downstream 757418 17944726 ~ 17995069 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other upstream 1620040 15564981 ~ 15566668 (+)
G45419 sgip1,sgip1a,LOC107739126 other upstream 1727322 15358861 ~ 15459386 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other upstream 1942428 15236165 ~ 15244280 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other upstream 3206422 13972173 ~ 13980286 (+)
G44887 NA other upstream 3776796 13394229 ~ 13409912 (+)
G46022 NA other downstream 807883 17995191 ~ 17996717 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other downstream 969347 18156655 ~ 18166242 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other downstream 1389870 18577178 ~ 18616958 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other downstream 2075276 19262584 ~ 19347629 (+)
itpr1a itpr1a,LOC107748403,LOC107711046,LOC107673508,LOC107585177 other downstream 2378703 19566011 ~ 19594008 (+)

Expression


Co-expression Network