G46305


Basic Information

Item Value
gene id G46305
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19229796 ~ 19230441 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU68591
CATTTCTCTAAGTGTTCCAGACTTGTATCCTCAGCAGCACCAATGCAGAACTTCTGTTGTCTCCGCTTCCAGTCGACCAGTTCCTCGTCTATAAGTGCTGAGCGCAGAACATCAGCGGCATCCAAAATAGCCGAGATATCAGACAGGAAGTTCTTCTACATTTATCGAGTGCATTGAGCATCTTCTGAAGACCTTCTACTTgcattttcttctcttcttctgtgCAAGCTAAAGGCacattaaacatacatacacacattaagtCAAGTCACcctttttatataatgtttttaacaatacagattgtgtcaaagtaGTTTTGcagtattaaatatgaaaaagtgtgtcaataatgcaaaaggacaatagtaaacactcaattttcacTTAAGGGCAGATTAACAACACCGTATATAGTGAAATTAAAGACagtgtgtttaaataaagtgtgcAGCCTCACAGTCCATTCGGTGTGTTTGATACTTAAAATCAAACTCATCCTGCTGCTCCTCCAAACATCTTATGCTGTGCTCCATCGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68591 True 541 lncRNA 0.39 2 19229796 19230441

Neighbor

gene id symbol gene type direction distance location
gpr84 gpr84,LOC107711075,LOC107585210,LOC107582713,LOC107733593,LOC107682832 coding upstream 10770 19215804 ~ 19219026 (+)
LOC122347426 LOC107585140,LOC107733596,LOC107667370,LOC107673453,LOC107582714,LOC107733594,LOC107711002,LOC107667371,LOC107585181,LOC107582832 coding upstream 16410 19208664 ~ 19213386 (+)
LOC122347294 LOC107711002,LOC107585140,LOC107733596,LOC107733594,LOC107667370,LOC107667371,LOC107711003,LOC107585181,LOC107582832,LOC107667300 coding upstream 24012 19192088 ~ 19205784 (+)
slc48a1b slc48a1b,LOC107585148,LOC107711080,LOC107733581,LOC107685336,LOC108441111 coding upstream 116233 19110188 ~ 19113563 (+)
bin2b bin2b,LOC107673593,LOC107711079,LOC107685284,LOC107585145,LOC107582721,LOC107733580 coding upstream 121087 19101218 ~ 19108709 (+)
tac3b NA coding downstream 10372 19240813 ~ 19243429 (+)
b4galnt1b b4galnt1b,LOC107673615,LOC107667298,LOC107711068,LOC107585207,LOC107733607,LOC107582708 coding downstream 31138 19261579 ~ 19275263 (+)
ankrd33ab LOC107711022,LOC107582706,LOC107585135,LOC107667328 coding downstream 57986 19288427 ~ 19290867 (+)
si:dkey-195m11.11 NA coding downstream 62205 19292646 ~ 19297765 (+)
krt18b zgc:77517,LOC107585131,LOC107673602,LOC107711062,LOC107733602,LOC107667394,LOC107582704 coding downstream 98078 19328519 ~ 19332524 (+)
G46265 NA non-coding upstream 6510 19221292 ~ 19223286 (+)
trnaq-uug_14 NA non-coding upstream 77623 19152102 ~ 19152173 (+)
G46272 LOC107585146,LOC107711077,LOC107673565,LOC107733590,LOC107667372,LOC107582718 non-coding upstream 96193 19118052 ~ 19133603 (+)
G46275 NA non-coding upstream 173665 19055216 ~ 19056131 (+)
G46261 NA non-coding upstream 233376 18995338 ~ 18996420 (+)
G46300 c1galt1b,LOC107711070,LOC107673577,LOC107585137,LOC107579179,LOC107667385,LOC107733588 non-coding downstream 16612 19247053 ~ 19298999 (+)
G46299 NA non-coding downstream 69954 19300395 ~ 19303013 (+)
G46347 NA non-coding downstream 155165 19385606 ~ 19454365 (+)
G46353 dip2bb,LOC107740567,LOC106565592 non-coding downstream 174024 19404465 ~ 19407876 (+)
G46355 NA non-coding downstream 178307 19408748 ~ 19409488 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other upstream 612838 18577178 ~ 18616958 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other upstream 1063554 18156655 ~ 18166242 (+)
G46022 NA other upstream 1233079 17995191 ~ 17996717 (+)
G45894 NA other upstream 2042488 17186708 ~ 17187308 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other upstream 3663128 15564981 ~ 15566668 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other downstream 32143 19262584 ~ 19347629 (+)
itpr1a itpr1a,LOC107748403,LOC107711046,LOC107673508,LOC107585177 other downstream 335570 19566011 ~ 19594008 (+)
ghrl LOC107585199,LOC107711011,LOC107673481 other downstream 553736 19784177 ~ 19786297 (+)
LOC122347202 uqcc2,cf125,LOC107580205,LOC108440614,LOC107667355,LOC106565356 other downstream 612606 19843047 ~ 19846548 (+)
slc6a11a slc6a11a,LOC108440580,LOC107673588 other downstream 636118 19866559 ~ 19873535 (+)

Expression


Co-expression Network