Item | Value |
---|---|
gene id | G25515 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000004 |
NCBI id | null |
chromosome length | 17451736 |
location | 1426692 ~ 1427877 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU28786 | True | 498 | lncRNA | 0.37 | 3 | 1426692 | 1427877 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000004_01404265_01425424 | NA | coding | downstream | 1268 | 1404265 ~ 1425424 (-) |
CI01000004_01394018_01397517 | TMEM125B | coding | downstream | 29175 | 1393969 ~ 1397517 (-) |
CI01000004_01352499_01377500 | SLC1A7A, SLC1A7 | coding | downstream | 49177 | 1352073 ~ 1377515 (-) |
CI01000004_01311508_01319203 | ALDH9A1B, ALDH9A1 | coding | downstream | 107489 | 1311055 ~ 1319203 (-) |
CI01000004_01280983_01292761 | FZR1B | coding | downstream | 133931 | 1280585 ~ 1292761 (-) |
CI01000004_01440447_01443088 | NA | coding | upstream | 11894 | 1439771 ~ 1443292 (-) |
CI01000004_01554696_01564701 | NA | coding | upstream | 126779 | 1554656 ~ 1564701 (-) |
CI01000004_01605140_01622364 | NA | coding | upstream | 176675 | 1604552 ~ 1622364 (-) |
CI01000004_01626984_01627238 | NA | coding | upstream | 198339 | 1626216 ~ 1627238 (-) |
CI01000004_01758554_01762415 | NA | coding | upstream | 330545 | 1758422 ~ 1762415 (-) |
G25527 | NA | non-coding | downstream | 92703 | 1332563 ~ 1333989 (-) |
G25524 | NA | non-coding | downstream | 95939 | 1330371 ~ 1330753 (-) |
G25525 | NA | non-coding | downstream | 102402 | 1321082 ~ 1324290 (-) |
CI01000004_01230991_01235864 | NA | non-coding | downstream | 189461 | 1230896 ~ 1235864 (-) |
G25451 | NA | non-coding | downstream | 294115 | 1132270 ~ 1132577 (-) |
G25511 | NA | non-coding | upstream | 3970 | 1431847 ~ 1435337 (-) |
G25572 | NA | non-coding | upstream | 21258 | 1449135 ~ 1449927 (-) |
G25561 | NA | non-coding | upstream | 119874 | 1547751 ~ 1552872 (-) |
G25601 | NA | non-coding | upstream | 147002 | 1574879 ~ 1575219 (-) |
G25602 | NA | non-coding | upstream | 147391 | 1575268 ~ 1575565 (-) |
CI01000004_01773383_01774888 | INSL5B | other | upstream | 345163 | 1772928 ~ 1774942 (-) |
G26788 | NA | other | upstream | 1846556 | 3267683 ~ 3275721 (-) |
G27746 | NA | other | upstream | 3750350 | 5178227 ~ 5203724 (-) |
CI01000004_05617072_05627369 | NA | other | upstream | 4192506 | 5616644 ~ 5628289 (-) |
CI01000004_06539836_06541252 | NA | other | upstream | 5106950 | 6538904 ~ 6541252 (-) |