G46420 (LOC107752101,LOC107678225,LOC107581302)


Basic Information

Item Value
gene id G46420
gene name LOC107752101,LOC107678225,LOC107581302
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18644306 ~ 18645134 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU68751
GGGAGCTCCGCAAAGAAGAAAAGAGTTTACGATGAGATAAGCCAGGAAATGCTGAACGGGGGCTTCAGTCGCTCGACCGAGCAAATCGAAAATAAGTTAAAGAAGCTCAGAAAGGAGTACAGGGACCTGAAAAGGAAACCGAGTGAGAGTGATAGTGGGCAGATTAGTAAAACATTCGACCACGAAGTTATGGAGTCTGTGCTGGAGCATGGACCAAGCAGTCATCTGACTGGGGCCTTTAATTCAGCGACAGACACTCTTGAGAAAAACGCGGACTTCGTTGCGTTTTCTGTAACCGAGCTAGgtAGCAAAATATCTGAGCCCAAAACAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107752101

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68751 True 331 TUCP 0.47 2 18644306 18645134

Neighbor

gene id symbol gene type direction distance location
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289,LOC107582724 coding downstream 155432 18458127 ~ 18488874 (-)
LOC122346396 gabrg3 coding downstream 188519 18363838 ~ 18455787 (-)
nipa1 nipa1,LOC107716965 coding downstream 436672 18205651 ~ 18207634 (-)
nipa2 nipa2,LOC107673599,LOC107716965,LOC107685294,LOC107582725 coding downstream 439072 18198983 ~ 18205234 (-)
LOC122346611 fndc9,LOC107673533,LOC107585156,LOC107711090,LOC107716964,LOC107580334,LOC107685295 coding downstream 452783 18187428 ~ 18191523 (-)
LOC122346546 dtd1,LOC107752123,LOC107678219,LOC107660112,LOC107753913,LOC107551933 coding upstream 57720 18702854 ~ 18705732 (-)
LOC122346645 LOC106676354,LOC106674584,LOC106676400 coding upstream 97931 18743065 ~ 18744116 (-)
LOC122347578 LOC107678224,LOC107752100,LOC107581387 coding upstream 118111 18763245 ~ 18765483 (-)
LOC122346582 LOC107584426,LOC107673614,LOC107712092 coding upstream 340916 18986050 ~ 18988440 (-)
cnga3a LOC107585144,LOC107711084,LOC107673541,LOC107685324,LOC107733584 coding upstream 426271 19071405 ~ 19078891 (-)
LOC122346470 NA non-coding downstream 953 18642722 ~ 18643353 (-)
G46172 NA non-coding downstream 284325 18359679 ~ 18359981 (-)
G46160 NA non-coding downstream 311040 18332843 ~ 18333266 (-)
G46140 NA non-coding downstream 393671 18249934 ~ 18250635 (-)
G46092 NA non-coding downstream 526724 18117356 ~ 18117582 (-)
G46421 NA non-coding upstream 11708 18656842 ~ 18721168 (-)
G46432 LOC107752101,LOC107678225,LOC107581302,LOC107551936,LOC107753899,LOC107672678 non-coding upstream 116450 18761584 ~ 18762435 (-)
G46439 NA non-coding upstream 212578 18857712 ~ 18858471 (-)
G46444 NA non-coding upstream 237718 18882852 ~ 18886400 (-)
G46463 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 non-coding upstream 325036 18970170 ~ 18972370 (-)
opa1 opa1,LOC107585173,LOC107711112,LOC107582739,LOC107673572,LOC107722677 other downstream 870199 17743715 ~ 17774107 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other downstream 1230167 17382327 ~ 17414139 (-)
G45910 NA other downstream 1335828 17307815 ~ 17308478 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other downstream 1397920 17235790 ~ 17246386 (-)
G45895 NA other downstream 1456988 17186689 ~ 17187318 (-)
LOC122347235 NA other upstream 61489 18706623 ~ 18707596 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other upstream 69040 18714174 ~ 18717488 (-)
G46478 NA other upstream 410012 19055146 ~ 19056131 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other upstream 469927 19115061 ~ 19149731 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 908183 19553317 ~ 19555942 (-)

Expression


Co-expression Network