G46421


Basic Information

Item Value
gene id G46421
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18656842 ~ 18721168 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU68753
ACTGGTGAACGTGAGATAAAAATAGAGAAAGGAGAAACATTTTTCAGGCATAAAAGCACAACTTTGTTTTGTTATGTCATTTTGCATTTCAGACCCACCATTCACACCATTGTAAAGGCTCCGATGGTGTGGCGACAGCTCTTCTCCTGCCAACCTCCGAGGTGACGCCTCTCTACCAGGGCTGCCAAACTTCCCATGTTCAGGGCTCATGCTGTACTGGTGCAGAGACGTCACCTCGGAGGTTGGCAGGAGAAGAGCTGTCGCCACACCATCGGAGCCTTTACAATGGTGTGAATGCTTTGATATCAGCAGGATGTTGCAGCAACAACTGCAGGAACGTGAAGCTCTGGGACAGTTTTGATGGCTCCTCTTGACCACGCCGTTGACCGGAGGTATGGCTTGACTCAGGGGCCCCAGGAGTCCCGCTCTCACCAGGCACATATTCCATCCCTTCACCTCGACAGTCAGGCCCCATTTGAGTTTTCATAACAGCAGTCGCTTTGTGGGACCCTCTGGTGCAATCATTCGAACGGGGACTGGAGCGAGACCCAGGATGTTTTCGGGTGAAAGACGACGCTCGCGCAAAccacagaaacagacacacCCACGCACGACTATGAGAATCTAAATGTCTCCTGTGGTTTACAGATGTTTAACAGTACTGCATTTGGGTAATCAAACACTCGAGCCGTCCCTCTCTCTATATCGGTGTCTCTCTGTATCATCCTGAGTAGCAATAGGACACAAGAAACACAATGCTGTGGCTTCTCTGAAGGTGCTTCCCTGCccttgatgtttatttatgcagtttCTTTTCAACCAAAGCAGTTTGAAATATCTCTAACCATGCATCTATGATGGAGTATCAGTATCATGTTTGCTAGTTTTTCCATATCTtggattgtttttatttttacatgcgaGGTGTTTCTGAACACCAACGAAAGCAGAATGGACTCTGTACATGTTGTCAGTGGCTGAATAACCTCATCAGTGTTTTCActgatcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68753 True 1047 lncRNA 0.48 5 18656842 18721168

Neighbor

gene id symbol gene type direction distance location
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289,LOC107582724 coding downstream 167968 18458127 ~ 18488874 (-)
LOC122346396 gabrg3 coding downstream 201055 18363838 ~ 18455787 (-)
nipa1 nipa1,LOC107716965 coding downstream 449208 18205651 ~ 18207634 (-)
nipa2 nipa2,LOC107673599,LOC107716965,LOC107685294,LOC107582725 coding downstream 451608 18198983 ~ 18205234 (-)
LOC122346611 fndc9,LOC107673533,LOC107585156,LOC107711090,LOC107716964,LOC107580334,LOC107685295 coding downstream 465319 18187428 ~ 18191523 (-)
LOC122346645 LOC106676354,LOC106674584,LOC106676400 coding upstream 21897 18743065 ~ 18744116 (-)
LOC122347578 LOC107678224,LOC107752100,LOC107581387 coding upstream 42077 18763245 ~ 18765483 (-)
LOC122346582 LOC107584426,LOC107673614,LOC107712092 coding upstream 264882 18986050 ~ 18988440 (-)
cnga3a LOC107585144,LOC107711084,LOC107673541,LOC107685324,LOC107733584 coding upstream 350237 19071405 ~ 19078891 (-)
hdac7b NA coding upstream 392510 19113678 ~ 19123976 (-)
LOC122346470 NA non-coding downstream 13489 18642722 ~ 18643353 (-)
G46172 NA non-coding downstream 296861 18359679 ~ 18359981 (-)
G46160 NA non-coding downstream 323576 18332843 ~ 18333266 (-)
G46140 NA non-coding downstream 406207 18249934 ~ 18250635 (-)
G46092 NA non-coding downstream 539260 18117356 ~ 18117582 (-)
G46432 LOC107752101,LOC107678225,LOC107581302,LOC107551936,LOC107753899,LOC107672678 non-coding upstream 40416 18761584 ~ 18762435 (-)
G46439 NA non-coding upstream 136544 18857712 ~ 18858471 (-)
G46444 NA non-coding upstream 161684 18882852 ~ 18886400 (-)
G46463 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 non-coding upstream 249002 18970170 ~ 18972370 (-)
G46476 NA non-coding upstream 322448 19043616 ~ 19043869 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 11708 18644306 ~ 18645134 (-)
opa1 opa1,LOC107585173,LOC107711112,LOC107582739,LOC107673572,LOC107722677 other downstream 882735 17743715 ~ 17774107 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other downstream 1242703 17382327 ~ 17414139 (-)
G45910 NA other downstream 1348364 17307815 ~ 17308478 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other downstream 1410456 17235790 ~ 17246386 (-)
G46478 NA other upstream 333978 19055146 ~ 19056131 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other upstream 393893 19115061 ~ 19149731 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 832149 19553317 ~ 19555942 (-)
tomm6 NA other upstream 1120311 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 1121876 19843044 ~ 19847432 (-)

Expression


Co-expression Network