LOC122347235


Basic Information

Item Value
gene id LOC122347235
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18706623 ~ 18707596 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU68764
acaAACACGGGTGTCCTTGTGAACGTTGGCATCCTCGCAATTTTAtatcctacatttttttttacaataaattacagCTATGAAGGTTAATCCTGATAAATGGTACCGGAATGCGTCAATGCTGTATGCTATTGGTGTTTGGACCGTACTTGgtagtttattttgtaaatacaggTTCGGAGATAACGTAGCCAAAGttgaacAGGTCGATGACGACGAGCATAACGTGGAGgtatatgaaacaaaatatacTCGGACCACAATTATCTACAAGAAGGATTCTGTGCCATATTCCACAATGCTTCTCAACTACATCAATTCTAAGTTTGGGAGCTCTAAAGAGAGTCAAAAC
>XM_043242401.1
TGacggaaagaaataaaaagaagaagacaAACACGGGTGTCCTTGTGAACGTTGGCATCCTCGCAATTTTAtatcctacatttttttttacaataaattacagCTATGAAGGTTAATCCTGATAAATGGTACCGGAATGCGTCAATGCTGTATGCTATTGGTGTTTGGACCGTACTTGgtagtttattttgtaaatacaggTTCGGAGATAACGTAGCCAAAGttgaacAGGTCGATGACGACGAGCATAACGTGGAGgtatatgaaacaaaatatacTCGGACCACAATTATCTACAAGAAGGATTCTGTGCCATATTCCACAATGCTTCTCAACTACATCAATTCTAAGTTTGGGAGCTCTAAAGAGAGTCAAAACAAGAAGACGGAAATGAGCTGACTGTTTGCTTGCTTGGTTTTCAGAAGAAAAGattcattgttttttcatttctaaattaaaaagcaaaatctGTGTTTTGCAATGCTACGACATGAATAACGTATCTGATGGTTGGCTTTGGAGATCTAAAGGTGAATATTTTGTTCGTTGCATCGGTGTTAAATAAACAGTTGACCCCAAAAAAGGAAATTTAATGAAGAGTTTACTCACATTAAAGACAAGGGTGATTTAGTTTTGCTTCCAGAACagattaattgaaatgtaaCATTAAGTTCCTTGttcagtggatcctctgcagtgcaTGAGTGCTGTCAGAAAGAGTCAGATGGCACCTCACAGCAATCCACACCACTTCAGCCCACCACttaatgtcattaaataaagtcaaaagctttgtaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68764 False 352 lncRNA 0.39 2 18707047 18707570
XM_043242401.1 True 802 mRNA 0.37 2 18706623 18707596

Neighbor

gene id symbol gene type direction distance location
LOC122346546 dtd1,LOC107752123,LOC107678219,LOC107660112,LOC107753913,LOC107551933 coding downstream 891 18702854 ~ 18705732 (-)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289,LOC107582724 coding downstream 217749 18458127 ~ 18488874 (-)
LOC122346396 gabrg3 coding downstream 250836 18363838 ~ 18455787 (-)
nipa1 nipa1,LOC107716965 coding downstream 498989 18205651 ~ 18207634 (-)
nipa2 nipa2,LOC107673599,LOC107716965,LOC107685294,LOC107582725 coding downstream 501389 18198983 ~ 18205234 (-)
LOC122346645 LOC106676354,LOC106674584,LOC106676400 coding upstream 35469 18743065 ~ 18744116 (-)
LOC122347578 LOC107678224,LOC107752100,LOC107581387 coding upstream 55649 18763245 ~ 18765483 (-)
LOC122346582 LOC107584426,LOC107673614,LOC107712092 coding upstream 278454 18986050 ~ 18988440 (-)
cnga3a LOC107585144,LOC107711084,LOC107673541,LOC107685324,LOC107733584 coding upstream 363809 19071405 ~ 19078891 (-)
hdac7b NA coding upstream 406082 19113678 ~ 19123976 (-)
G46412 sec23b,LOC107678217,LOC107752097,LOC107581388,LOC107551934,LOC107753900 non-coding downstream 19799 18603991 ~ 18686824 (-)
LOC122346470 NA non-coding downstream 63270 18642722 ~ 18643353 (-)
G46172 NA non-coding downstream 346642 18359679 ~ 18359981 (-)
G46160 NA non-coding downstream 373357 18332843 ~ 18333266 (-)
G46140 NA non-coding downstream 455988 18249934 ~ 18250635 (-)
G46432 LOC107752101,LOC107678225,LOC107581302,LOC107551936,LOC107753899,LOC107672678 non-coding upstream 53988 18761584 ~ 18762435 (-)
G46439 NA non-coding upstream 150116 18857712 ~ 18858471 (-)
G46444 NA non-coding upstream 175256 18882852 ~ 18886400 (-)
G46463 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 non-coding upstream 262574 18970170 ~ 18972370 (-)
G46476 NA non-coding upstream 336020 19043616 ~ 19043869 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 61489 18644306 ~ 18645134 (-)
opa1 opa1,LOC107585173,LOC107711112,LOC107582739,LOC107673572,LOC107722677 other downstream 932516 17743715 ~ 17774107 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other downstream 1292484 17382327 ~ 17414139 (-)
G45910 NA other downstream 1398145 17307815 ~ 17308478 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other downstream 1460237 17235790 ~ 17246386 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other upstream 6578 18714174 ~ 18717488 (-)
G46478 NA other upstream 347550 19055146 ~ 19056131 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other upstream 407465 19115061 ~ 19149731 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 845721 19553317 ~ 19555942 (-)
tomm6 NA other upstream 1133883 19841479 ~ 19842994 (-)

Expression


Co-expression Network