G46444


Basic Information

Item Value
gene id G46444
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18882852 ~ 18886400 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU68781
tggcagtgtcctcataaaccacttttaaattgtaatacctccatcatacccatgtcattcaacaaatttgtgtccccataaaaaaacaaaaaccagcacacatacatacaaaacataATTCTGTTCAGTATGTTCAGTTTTGGttcccactgactttcattgcaTTATTTCTCACAGAGTGGAAGTCAGTGGAAACCAACGTAGTTACCAATATTCCTCAAAAAGAGGAAtcagaagaaataaatgcatacagttttggaacaacacacGACACAAGGGTGAGGATTTTCCAGTTTTTTGgttgaattatccctttaattttCAATTACATAATATAGTGAtcattaagtatatttttattgagtGCATATTTCAACAGTTGTCTGGAATACAATAGACAAAAGGTGCATTTTAGATCAGTTAcactgtcacggttgtgtggtaagcacgagagcacataacgagataaaataaacttaaatggatttaatctcaaaaatgacaaaataaagatataaaggcaggcaggcaggcaggcaggtaggtagaacaggcaggcaggataaacacgggtgtagacatcgggtagggaccttgacgctcggaccaacagaactcaaaacacaggacttaaatacacagggtaattgacgagacacagctgatgacaataacataattaacacagagggaaggcagggcacagggagcacatggcatgaaacgaaaacataaacacagagtccagagatgtgacatacACATTGCCCAATATACTCAATATATTACccacataaaaaaagtataggAATAGGTGAGTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68781 True 824 lncRNA 0.38 2 18882852 18886400

Neighbor

gene id symbol gene type direction distance location
LOC122347578 LOC107678224,LOC107752100,LOC107581387 coding downstream 117369 18763245 ~ 18765483 (-)
LOC122346645 LOC106676354,LOC106674584,LOC106676400 coding downstream 138736 18743065 ~ 18744116 (-)
LOC122346546 dtd1,LOC107752123,LOC107678219,LOC107660112,LOC107753913,LOC107551933 coding downstream 177120 18702854 ~ 18705732 (-)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289,LOC107582724 coding downstream 393978 18458127 ~ 18488874 (-)
LOC122346396 gabrg3 coding downstream 427065 18363838 ~ 18455787 (-)
LOC122346582 LOC107584426,LOC107673614,LOC107712092 coding upstream 99650 18986050 ~ 18988440 (-)
cnga3a LOC107585144,LOC107711084,LOC107673541,LOC107685324,LOC107733584 coding upstream 185005 19071405 ~ 19078891 (-)
hdac7b NA coding upstream 227278 19113678 ~ 19123976 (-)
tns2b LOC107711076,LOC107673525,LOC107585141 coding upstream 266639 19153039 ~ 19173171 (-)
eif4bb eif4bb,LOC107673526,LOC107711078,LOC107585139,LOC107582715,LOC107733597 coding upstream 289466 19175866 ~ 19187427 (-)
G46439 NA non-coding downstream 24381 18857712 ~ 18858471 (-)
G46432 LOC107752101,LOC107678225,LOC107581302,LOC107551936,LOC107753899,LOC107672678 non-coding downstream 120417 18761584 ~ 18762435 (-)
G46421 NA non-coding downstream 161684 18656842 ~ 18721168 (-)
G46412 sec23b,LOC107678217,LOC107752097,LOC107581388,LOC107551934,LOC107753900 non-coding downstream 196028 18603991 ~ 18686824 (-)
LOC122346470 NA non-coding downstream 239499 18642722 ~ 18643353 (-)
G46463 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 non-coding upstream 83770 18970170 ~ 18972370 (-)
G46476 NA non-coding upstream 157216 19043616 ~ 19043869 (-)
G46477 LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 non-coding upstream 158228 19044628 ~ 19048836 (-)
LOC122347223 NA non-coding upstream 263346 19149746 ~ 19151694 (-)
G46509 NA non-coding upstream 326239 19212639 ~ 19242811 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 165364 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 175256 18706623 ~ 18707596 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 237718 18644306 ~ 18645134 (-)
opa1 opa1,LOC107585173,LOC107711112,LOC107582739,LOC107673572,LOC107722677 other downstream 1108745 17743715 ~ 17774107 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other downstream 1468713 17382327 ~ 17414139 (-)
G46478 NA other upstream 168746 19055146 ~ 19056131 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other upstream 228661 19115061 ~ 19149731 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 666917 19553317 ~ 19555942 (-)
tomm6 NA other upstream 955079 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 956644 19843044 ~ 19847432 (-)

Expression


Co-expression Network