G46478


Basic Information

Item Value
gene id G46478
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19055146 ~ 19056131 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU68851
ACGCGATTTGTTTTAGCCTAGCAGTTCTTGAAGTCTTGTGTCAGTGCAAAATCTACTTAAATGATTTAAGCAGTTCATTACCAACAGTTTCTTTTCCCCGCAAGTTCACATTTTCACAATGAgcgaaaaacaaacaaaaaatgtcagaatAAAACAACGGAGGGTTGCGGAGTTTTCCAACAACTACAGCAAGCAGGCATTAACGACAAAGGCTTCTCGTCTCCGTTTTGACAGCAAAGACGTAACTCCAGGTTTGCTGTTTTAACTTGTTCAGTGTTTCTGCTGTATTTAAATGGATTTAGCCTTCCAGAGAAAAGCGCTTTGGTTGAGGCTGCTTCTTCTGAAATGACCGCCGGTAGAAAGCATCTGCTTGAGTGATTGCAGCGAAAGCCATTTTATCCCGTCTCAGAACAGATATACTTGCAGACACCATCATAATTCATTCGGCGAGATACTAAATGGTGCTTTATAGTGTTCTCAGCGTGGCTTAATTGACATTTGATACCTGAACATGACTAATGATGCAAGAACACTTTAAGAAACATCTGTCCTCTCTTCCCCTGCCCGAAACCTCGAAACAGAAGCACTTTACTCATGTCGCCTTACTTCTCCTTGTGTCAATAAATGCTCTACACGAAGGTCAGAGGAGACTGAAGAGTTCGAATCATAAGTTAATTCATGCTGACGTTGCTGAAGCAGGAGCAGAGAGGAGCAGTCTTCGGTATGCAGGTGATAGCTCGTCTTACAGCGCTTTCCTTCTCATCAGCTTTAGAATGTGGTTAAATGGCACCGACGAAGAAGCACTCATCAATCAGCCAGCAGCTGAGCCTCTCTGTCTTTACAATTCATTTTCATCTTGGACGGAAGCCATCAAAGTCACTCTCTCAAAGGCCTAATGGACAAACAACTTTGCTAAGATCAGCACAAGACCTTTTTCAAAGGCGGAATCGTACCGTTGTTGTAAGAAACCTTTTGAGCCTCAAATA

Function

NR:

description
homeodomain-interacting protein kinase 2-like, partial

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0048468 cell development biological_process
GO:0022607 cellular component assembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68851 True 986 TUCP 0.42 1 19055146 19056131

Neighbor

gene id symbol gene type direction distance location
LOC122346582 LOC107584426,LOC107673614,LOC107712092 coding downstream 66706 18986050 ~ 18988440 (-)
LOC122347578 LOC107678224,LOC107752100,LOC107581387 coding downstream 289663 18763245 ~ 18765483 (-)
LOC122346645 LOC106676354,LOC106674584,LOC106676400 coding downstream 311030 18743065 ~ 18744116 (-)
LOC122346546 dtd1,LOC107752123,LOC107678219,LOC107660112,LOC107753913,LOC107551933 coding downstream 349414 18702854 ~ 18705732 (-)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289,LOC107582724 coding downstream 566272 18458127 ~ 18488874 (-)
cnga3a LOC107585144,LOC107711084,LOC107673541,LOC107685324,LOC107733584 coding upstream 15274 19071405 ~ 19078891 (-)
hdac7b NA coding upstream 57547 19113678 ~ 19123976 (-)
tns2b LOC107711076,LOC107673525,LOC107585141 coding upstream 96908 19153039 ~ 19173171 (-)
eif4bb eif4bb,LOC107673526,LOC107711078,LOC107585139,LOC107582715,LOC107733597 coding upstream 119735 19175866 ~ 19187427 (-)
LOC122347293 LOC107711003,LOC107667371,LOC107585181,LOC107673453,LOC107711002 coding upstream 132364 19188495 ~ 19190509 (-)
G46477 LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 non-coding downstream 6310 19044628 ~ 19048836 (-)
G46476 NA non-coding downstream 11277 19043616 ~ 19043869 (-)
G46463 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 non-coding downstream 82776 18970170 ~ 18972370 (-)
G46444 NA non-coding downstream 168746 18882852 ~ 18886400 (-)
G46439 NA non-coding downstream 196675 18857712 ~ 18858471 (-)
LOC122347223 NA non-coding upstream 93615 19149746 ~ 19151694 (-)
G46509 NA non-coding upstream 156508 19212639 ~ 19242811 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding upstream 337346 19393477 ~ 19397730 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding upstream 550231 19606362 ~ 19607056 (-)
G46658 NA non-coding upstream 735511 19791642 ~ 19792328 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 337658 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 347550 18706623 ~ 18707596 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 410012 18644306 ~ 18645134 (-)
opa1 opa1,LOC107585173,LOC107711112,LOC107582739,LOC107673572,LOC107722677 other downstream 1281039 17743715 ~ 17774107 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other downstream 1641007 17382327 ~ 17414139 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other upstream 58930 19115061 ~ 19149731 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 497186 19553317 ~ 19555942 (-)
tomm6 NA other upstream 785348 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 786913 19843044 ~ 19847432 (-)
LOC122347177 LOC107584418 other upstream 843541 19899672 ~ 19956730 (-)

Expression


Co-expression Network