tomm6


Basic Information

Item Value
gene id tomm6
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19841479 ~ 19842994 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU69298
CTGTTAACCTCGTGGTTTGCCGTAGAAAGCTCAAGGTAATATCAAAGAGCCTTTGGCTTGCTTGGAAATTTATCTACAAATAAAATGAGCGGAAAGAAAACAGATGGGCGATCAGGTGGTGCCATGGGATGGATAAGCTCAGCTTGCCGTTTCGCGGCGGACAGAAATGATTTCAGAAGGAATCTCCTCGTAAACCTGGGTTTATTCGCAGCAGGTGTTTGGGTCGCAAGAAACCTTTCAGATTTTGACTTGATGTCTCCTCAGCCAGTCACGTAGCTCCCACccagcaaaaaatatatattttaacagGTAGTGGTGAAATGAAAGAACATACATTTTCCACCGAGGGTCTTGTTGAACAAGCCCATTCAACGCTGAAGGGAATAACTATTGGATATTCACAACTGTAGATTTCTTCTGTACTTCATTgtgttttgttgaaataaatatcacacTTAATCAGTTGCTTACAGCCTTTTATTTAAGAATAcacatattaatattcaaaaaattaaaatgtccatTGCAGTTAGTATTTTAGAACATGTCATGGTGCCCATTTCTTAAAGAGCATTCTTCTTTGTTGCATTTCCACACTTGCAGTTTCCTATTTTTCAGAGAAAACTCTCATCCAGGTGTCTTTTTCTGATCTGAGAACAAAATTACCATTTTAGAGTTTCTTTTAGAGGAATCTTCACTCAGGATGAATACTTGCATTAAACAACACATTGTATCGTCAAGACAAGGACGTCACCTCGTGTGTGCAGCCAGTATCAGAGCACTGGAAGATCTATTGTCACTCTTAGTTAGATGCAGCAAGAAGGATTCGGGAGCTAATTCCAGAATTGTTTTGATTTCCTCCACACGCACATTATCAGGAAATAGTGCATGGTCCTGCACAACAAACCTGTGTCC
>TU69300
CTGTTAACCTCGTGGTTTGCCGTAGAAAGCTCAAGGTAATATCAAAGAGCCTTTGGCTTGCTTGGAAATTTATCTACAAATAAAATGAGCGGAAAGAAAACAGATGGGCGATCAGGTGGTGCCATGGGATGGATAAGCTCAGCTTGCCGTTTCGCGGCGGACAGAAATGATTTCAGAAGGAATCTCCTCGTAAACCTGGGTTTATTCGCAGCAGGTGTTTGGGTCGCAAGAAACCTTTCAGATTTTGACTTGATGTCTCCTCAGCCAGTCACGTAGCTCCCACccagcaaaaaatatatattttaacagGTAGTGGTGAAATGAAAGAACATACATTTTCCACCGAGGGTCTTGTTGAACAAGCCCATTCAACGCTGAAGGGAATAACTATTGGATATTCACAACTGTAGATTTCTTCTGTACTTCATTgtgttttgttgaaataaatatcacacTTAAaaaaaaaaaaaaaaaaaaaaaaaaaaaagcagaa
>XM_043242355.1
TTCCAACCGAGGATCCGTAGCGCGATACTGTTAACCTCGTGGTTTGCCGTAGAAAGCTCAAGGTAATATCAAAGAGCCTTTGGCTTGCTTGGAAATTTATCTACAAATAAAATGAGCGGAAAGAAAACAGATGGGCGATCAGGTGGTGCCATGGGATGGATAAGCTCAGCTTGCCGTTTCGCGGCGGACAGAAATGATTTCAGAAGGAATCTCCTCGTAAACCTGGGTTTATTCGCAGCAGGTGTTTGGGTCGCAAGAAACCTTTCAGATTTTGACTTGATGTCTCCTCAGCCAGTCACGTAGCTCCCACccagcaaaaaatatatattttaacagGTAGTGGTGAAATGAAAGAACATACATTTTCCACCGAGGGTCTTGTTGAACAAGCCCATTCAACGCTGAAGGGAATAACTATTGGATATTCACAACTGTAGATTTCTTCTGTACTTCATTgtgttttgttgaaataaatatcacacTTAA

Function

NR:

description
PREDICTED: mitochondrial import receptor subunit TOM6 homolog

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU69298 True 915 lncRNA 0.40 3 19841841 19842967
TU69300 False 493 lncRNA 0.39 4 19841479 19842967
XM_043242355.1 False 486 mRNA 0.42 3 19842297 19842994

Neighbor

gene id symbol gene type direction distance location
crbn crbn,LOC107711034,LOC107748399 coding downstream 40910 19795103 ~ 19800569 (-)
vhl LOC107711035,LOC107673464,LOC107585106,LOC107667384,LOC107748400,LOC107582681 coding downstream 46853 19792750 ~ 19794626 (-)
tatdn2 LOC107673616,LOC107585107,LOC107711037 coding downstream 50029 19786424 ~ 19791450 (-)
ccdc174 ccdc174,LOC107673461,LOC107711012,LOC107585200,LOC107667317,LOC107582683,LOC107748410 coding downstream 56873 19780907 ~ 19784606 (-)
si:dkey-28n18.9 LOC107711013,LOC107585201,LOC107673478,LOC107582684,LOC107748409,LOC107667326 coding downstream 60724 19776312 ~ 19780755 (-)
ppil1 ppil1,LOC107673584,LOC107667353 coding upstream 30979 19873973 ~ 19875768 (-)
LOC122347195 LOC107584484,LOC107673448,LOC107712069,LOC107721173 coding upstream 62857 19905851 ~ 19908068 (-)
c6h1orf159 LOC107673608,LOC107712089,LOC107584440 coding upstream 68000 19910994 ~ 19913842 (-)
kbtbd12 kbtbd12,LOC107673613,LOC107712091,LOC107584421,LOC107721181,LOC107667403,LOC107568198 coding upstream 75059 19918053 ~ 19921278 (-)
p4htmb p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 coding upstream 85361 19928355 ~ 19934425 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding downstream 3432 19834070 ~ 19838047 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding downstream 39213 19801243 ~ 19802266 (-)
G46658 NA non-coding downstream 49151 19791642 ~ 19792328 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding downstream 234423 19606362 ~ 19607056 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding downstream 443749 19393477 ~ 19397730 (-)
LOC122347207 NA non-coding upstream 34318 19877312 ~ 19880588 (-)
G46803 NA non-coding upstream 125252 19968246 ~ 19968460 (-)
G46816 fkbp5,LOC107584436,LOC107712109,LOC107673486,LOC107721196,LOC107667344 non-coding upstream 211872 20054866 ~ 20115259 (-)
G46836 NA non-coding upstream 284954 20127948 ~ 20129839 (-)
G46838 NA non-coding upstream 306553 20149547 ~ 20152787 (-)
tsfm tsfm,LOC107711018,LOC107585120 other downstream 285537 19553317 ~ 19555942 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 691748 19115061 ~ 19149731 (-)
G46478 NA other downstream 785348 19055146 ~ 19056131 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 1123991 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 1133883 18706623 ~ 18707596 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 50 19843044 ~ 19847432 (-)
LOC122347177 LOC107584418 other upstream 56678 19899672 ~ 19956730 (-)
mustn1a mustn1a other upstream 155638 19998632 ~ 20000638 (-)
srsf3a LOC107712108,LOC107584442,LOC107673487,LOC107721197,LOC107667402 other upstream 253030 20096024 ~ 20102459 (-)
G46840 synpr,LOC107658112,LOC107673482,LOC107584506,LOC107712113,LOC107567085,LOC108436247 other upstream 318446 20161440 ~ 20166279 (-)

Expression


Co-expression Network