G46803


Basic Information

Item Value
gene id G46803
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19968246 ~ 19968460 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU69340
CGCTCTCTTCTGTTTGTGAGGCTCTTTTGGCTCAGATTCCTAGATAACTGCAGCTCTTTGCTGTCTGACATGCACCAGTACACCCACCccctaacacacacaaatacacacacttgtcTACATGCACATGCAAACACTCTCAGTGTAACTGGTCGCATGAAATTTAACAAATCCATCTGGAATCTACAAATAATCACACACAGTCATGCAGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69340 True 215 lncRNA 0.44 1 19968246 19968460

Neighbor

gene id symbol gene type direction distance location
LOC122347402 LOC107673562,LOC107712070,LOC107584441,LOC105017189 coding downstream 1822 19965403 ~ 19966424 (-)
arpc4 arpc4,LOC107721188,LOC103358720,LOC107568180,LOC100696600,LOC103386159 coding downstream 3425 19961196 ~ 19964821 (-)
LOC122347206 wu:fd14a01,LOC107575389,LOC108443910,LOC108254796,LOC107571573,LOC107705004 coding downstream 8589 19949312 ~ 19959657 (-)
p4htmb p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 coding downstream 33821 19928355 ~ 19934425 (-)
kbtbd12 kbtbd12,LOC107673613,LOC107712091,LOC107584421,LOC107721181,LOC107667403,LOC107568198 coding downstream 46968 19918053 ~ 19921278 (-)
eefsec eefsec,LOC107584423,LOC107667374,LOC107568193 coding upstream 20459 19988919 ~ 19994672 (-)
rft1 rft1,LOC107584424,LOC107673548,LOC107721169,LOC107712099,LOC107568194 coding upstream 32640 20001100 ~ 20004685 (-)
sirt4 sirt4,LOC107584486,LOC107712059,LOC107568197,LOC107721201,LOC107667314 coding upstream 37594 20006054 ~ 20009354 (-)
zgc:172271 zgc:172271,LOC107568196,LOC107721198,LOC107667401,LOC108440373,LOC105889207 coding upstream 41054 20009514 ~ 20016235 (-)
sfi1 LOC107712061,LOC107568189,LOC107667358,LOC107721191 coding upstream 48086 20016546 ~ 20025871 (-)
LOC122347207 NA non-coding downstream 87658 19877312 ~ 19880588 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding downstream 130199 19834070 ~ 19838047 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding downstream 165980 19801243 ~ 19802266 (-)
G46658 NA non-coding downstream 175918 19791642 ~ 19792328 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding downstream 361190 19606362 ~ 19607056 (-)
G46816 fkbp5,LOC107584436,LOC107712109,LOC107673486,LOC107721196,LOC107667344 non-coding upstream 86406 20054866 ~ 20115259 (-)
G46836 NA non-coding upstream 159488 20127948 ~ 20129839 (-)
G46838 NA non-coding upstream 181087 20149547 ~ 20152787 (-)
G46842 NA non-coding upstream 205078 20173538 ~ 20174291 (-)
LOC122347561 NA non-coding upstream 271342 20239802 ~ 20240436 (-)
LOC122347177 LOC107584418 other downstream 11516 19899672 ~ 19956730 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other downstream 120814 19843044 ~ 19847432 (-)
tomm6 NA other downstream 125252 19841479 ~ 19842994 (-)
tsfm tsfm,LOC107711018,LOC107585120 other downstream 412304 19553317 ~ 19555942 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 818515 19115061 ~ 19149731 (-)
mustn1a mustn1a other upstream 30172 19998632 ~ 20000638 (-)
srsf3a LOC107712108,LOC107584442,LOC107673487,LOC107721197,LOC107667402 other upstream 127564 20096024 ~ 20102459 (-)
G46840 synpr,LOC107658112,LOC107673482,LOC107584506,LOC107712113,LOC107567085,LOC108436247 other upstream 192980 20161440 ~ 20166279 (-)
G46926 NA other upstream 560719 20529179 ~ 20531834 (-)
mdfic2 LOC107667017,LOC107713509,LOC107584472,LOC107680698,LOC107599432 other upstream 1380159 21348619 ~ 21355381 (-)

Expression


Co-expression Network