mdfic2 (LOC107667017,LOC107713509,LOC107584472,LOC107680698,LOC107599432)


Basic Information

Item Value
gene id mdfic2
gene name LOC107667017,LOC107713509,LOC107584472,LOC107680698,LOC107599432
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 21348619 ~ 21355381 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU69891
TCTGCCCTGCCTACATGCTTTTCTCTCCGCCCGCGGAACCTGCGCACAATAACACCTGGAACTGCAGTTGTGATTTTGACTGTGGCCTTATGGACGCCTGCCACGAAACGGGGGAATGTCTTGAACTAGCGATGGAAATTTCAGAGGTTTGCTATCACTGAGGTACCCGCAAAAACGAAGATGCTGGGAGAAAACTTTACTATTTCACATCACTTTGGAATGAAAATGTGATAACAT
>XM_043242021.1
CCAGCAGTGACGACTAGCGGGAGTGTGAGAGAAACGAAATCCTCCCGTTCGCTCTGATGACAGCACTTCTGTTCCCGTCACTGAGATAACTGTGTATCAATGACAGATGGCTGGACAAAACTCGGAAATCGAGCTTGGTTTGATCAAAACTGGAGAGAGAAGCTCTTTGGTAAAAGCTGAGGTATCCAGCATAGCACCTGGACGGCTCTCACCCATTCCTGAGCTGGATCCCTGGGAGAGAGAAGCAGaaagcagctctacagaatTCACGTACTCCTTATGCTCGGTGGACAGGTACAGCACCGCCTCCTCCTCCAGCAGCTCTCTATCTGACTCCCAGGAGAGAGGAGAGTTCTGTGCCGGGATTGTGCTGAATTGTCTCTTCTGCCGATTCTACGACTTGTTCCTCATGCTACCTGAAACATGCGAGCGTGCTGCTAACTCCATCTGCCCTGCCTACATGCTTTTCTCTCCGCCCGCGGAACCTGCGCACAATAACACCTGGAACTGCAGTTGTGATTTTGACTGTGGCCTTATGGACGCCTGCCACGAAACGGGGGAATGTCTTGAACTAGCGATGGAAATTTCAGAGGTTTGCTATCACTGAGGTACCCGCAAAAACGAAGATGCTGGGAGAAAACTTTACTATTTCACATCACTTTGGAATGAAAATGTGATAACATGACAAGCTACTGTTAATGATTTCTGCACAACTAGTAACTATTTTGACTCTTATATCTAACATAACCAAGCCCTTAAACTTATGTCATTGGTTAAAGGGGTAAAGAAGTGCTTCCGATTTGTTGAGGTGAGTGGCTTTCACTTAAATAACATAAGACTTCCTGTAAAACAGGCTTCTCGacaaaaagtgtgttttgatACACTATCGAACTGATCAAATACTGAGAACAGAAATAAACTCGCAAGCACTTTCAAGTTTGGCATCGAAAGGCCGATGAAATGATTCTATCAGCTTTACTAGGTAAACAGTTCTACACAATAACAGGCCCTTGTGTCAGCGTATGTCGATTTTTATCACAATGAAGAGCGAAGTGGAGAGAAAAAGCCTTCAGTGTGTCCCTGTGTATATGGCTTGTTTAAACTAGAGTGCAGTTGTTAACAGTCGGTTTGAGACGGTGTTTTGTAGGACACTTGTCCTTCTAGGGCCCATCAACCTTTGTTCTTCGTTCAGGAAGACTGCTCTCTCGAGTGCACGGCGACGGTGTAATAGATCGTTTTTGTCAGTGCCAGGCTCTCGTCACGTAATGGGGAAAGCGACActtttgtgcgtgtgtttgtgtgtatgtaattCAGGCGTCTATTTCAGGGAGAGGTCAAGGTAAGAGAACGATCACGCCAGGCAGTGGGCTGGAGTGTTATTGTGTTATCTTGGCTTgctaaacatttgttttcagttaTCAGATAGAGATACTAAAGGAGTAACTGGGTTgttcaaacaatacaaaaaccTCAGAGCGGTATGCCAAGAAGTGCTGTAATAGTGCTTTTTCCtgtgtaaaacaaaaagtcatggcataaaatatgacttaaaaatatgatttgctGGATTGCTGGGTTGTCGCAATGAGCACTTTCGCTGGATTTACCATATTAGCagcattatattttcatttgatttaaggCCTTACTAGcatgtaaaattaataactaCAAGAAAAATTGTATAGGCTGACATACAACATATGTATCAGAGGCCAAAATTGTTAGAACACATTATCACATGCTCAAAAGGttacagttgtttttgttgaattgGCTATTATAATAACCATAAAACTAAGTGTTGCCGGAAATACCTGCAATGGAAGGAATTTGCTGcactaaaacattaacaatgatGGACTGACCCACTCGAAGTCCGAATCCCATCGAGCAAATTCGGGCCAAATAAACTAGACATCTATTGTACATTTAAAGGAAAGCCTTTGACAGAGCTGCAGAAGGCTCGGGATAACAGTGGTTTTGACGTTCTCAGGAAATAAATGTACTGACACTGTACCAGATAGATGTGCTGCTGTAATTGCTGCAAAAGGTggacataaatattaaaaagtaaaaagtggaTAAAGATTGTACGACTCACTTCGTTTGATATTTATTGTGGTCAGAGCAGCCATCTGCATATTTCATGCAAATTAGGAAATTAAATCATgctttgaatgcaaaaaaaagggCAATATGTTCAGATCTGTCAAGTGTTCTAACAATGTTGGCCCCTATTGTGATTTCAAATGATGAATCACAATtgatcacattcaaaataaaagtgtttaaataaataatacaagtgtactgtatatttattatatataaa
>XM_043242022.1
tcatttttgtgtttctgaaggCGCGTCTTTAAATCTCACGTGATGTCTTTAGGTTCCCGTCACTGAGATAACTGTGTATCAATGACAGATGGCTGGACAAAACTCGGAAATCGAGCTTGGTTTGATCAAAACTGGAGAGAGAAGCTCTTTGGTAAAAGCTGAGGTATCCAGCATAGCACCTGGACGGCTCTCACCCATTCCTGAGCTGGATCCCTGGGAGAGAGAAGCAGaaagcagctctacagaatTCACGTACTCCTTATGCTCGGTGGACAGGTACAGCACCGCCTCCTCCTCCAGCAGCTCTCTATCTGACTCCCAGGAGAGAGGAGAGTTCTGTGCCGGGATTGTGCTGAATTGTCTCTTCTGCCGATTCTACGACTTGTTCCTCATGCTACCTGAAACATGCGAGCGTGCTGCTAACTCCATCTGCCCTGCCTACATGCTTTTCTCTCCGCCCGCGGAACCTGCGCACAATAACACCTGGAACTGCAGTTGTGATTTTGACTGTGGCCTTATGGACGCCTGCCACGAAACGGGGGAATGTCTTGAACTAGCGATGGAAATTTCAGAGGTTTGCTATCACTGAGGTACCCGCAAAAACGAAGATGCTGGGAGAAAACTTTACTATTTCACATCACTTTGGAATGAAAATGTGATAACATGACAAGCTACTGTTAATGATTTCTGCACAACTAGTAACTATTTTGACTCTTATATCTAACATAACCAAGCCCTTAAACTTATGTCATTGGTTAAAGGGGTAAAGAAGTGCTTCCGATTTGTTGAGGTGAGTGGCTTTCACTTAAATAACATAAGACTTCCTGTAAAACAGGCTTCTCGacaaaaagtgtgttttgatACACTATCGAACTGATCAAATACTGAGAACAGAAATAAACTCGCAAGCACTTTCAAGTTTGGCATCGAAAGGCCGATGAAATGATTCTATCAGCTTTACTAGGTAAACAGTTCTACACAATAACAGGCCCTTGTGTCAGCGTATGTCGATTTTTATCACAATGAAGAGCGAAGTGGAGAGAAAAAGCCTTCAGTGTGTCCCTGTGTATATGGCTTGTTTAAACTAGAGTGCAGTTGTTAACAGTCGGTTTGAGACGGTGTTTTGTAGGACACTTGTCCTTCTAGGGCCCATCAACCTTTGTTCTTCGTTCAGGAAGACTGCTCTCTCGAGTGCACGGCGACGGTGTAATAGATCGTTTTTGTCAGTGCCAGGCTCTCGTCACGTAATGGGGAAAGCGACActtttgtgcgtgtgtttgtgtgtatgtaattCAGGCGTCTATTTCAGGGAGAGGTCAAGGTAAGAGAACGATCACGCCAGGCAGTGGGCTGGAGTGTTATTGTGTTATCTTGGCTTgctaaacatttgttttcagttaTCAGATAGAGATACTAAAGGAGTAACTGGGTTgttcaaacaatacaaaaaccTCAGAGCGGTATGCCAAGAAGTGCTGTAATAGTGCTTTTTCCtgtgtaaaacaaaaagtcatggcataaaatatgacttaaaaatatgatttgctGGATTGCTGGGTTGTCGCAATGAGCACTTTCGCTGGATTTACCATATTAGCagcattatattttcatttgatttaaggCCTTACTAGcatgtaaaattaataactaCAAGAAAAATTGTATAGGCTGACATACAACATATGTATCAGAGGCCAAAATTGTTAGAACACATTATCACATGCTCAAAAGGttacagttgtttttgttgaattgGCTATTATAATAACCATAAAACTAAGTGTTGCCGGAAATACCTGCAATGGAAGGAATTTGCTGcactaaaacattaacaatgatGGACTGACCCACTCGAAGTCCGAATCCCATCGAGCAAATTCGGGCCAAATAAACTAGACATCTATTGTACATTTAAAGGAAAGCCTTTGACAGAGCTGCAGAAGGCTCGGGATAACAGTGGTTTTGACGTTCTCAGGAAATAAATGTACTGACACTGTACCAGATAGATGTGCTGCTGTAATTGCTGCAAAAGGTggacataaatattaaaaagtaaaaagtggaTAAAGATTGTACGACTCACTTCGTTTGATATTTATTGTGGTCAGAGCAGCCATCTGCATATTTCATGCAAATTAGGAAATTAAATCATgctttgaatgcaaaaaaaagggCAATATGTTCAGATCTGTCAAGTGTTCTAACAATGTTGGCCCCTATTGTGATTTCAAATGATGAATCACAATtgatcacattcaaaataaaagtgtttaaataaataatacaagtgtactgtatatttattatatataaa
>XM_043242023.1
tcttttcaagaacCGGACCATAAATGACCCTTGTTTTGACATCACACTGTTAGACAGATGGCTGGACAAAACTCGGAAATCGAGCTTGGTTTGATCAAAACTGGAGAGAGAAGCTCTTTGGTAAAAGCTGAGGTATCCAGCATAGCACCTGGACGGCTCTCACCCATTCCTGAGCTGGATCCCTGGGAGAGAGAAGCAGaaagcagctctacagaatTCACGTACTCCTTATGCTCGGTGGACAGGTACAGCACCGCCTCCTCCTCCAGCAGCTCTCTATCTGACTCCCAGGAGAGAGGAGAGTTCTGTGCCGGGATTGTGCTGAATTGTCTCTTCTGCCGATTCTACGACTTGTTCCTCATGCTACCTGAAACATGCGAGCGTGCTGCTAACTCCATCTGCCCTGCCTACATGCTTTTCTCTCCGCCCGCGGAACCTGCGCACAATAACACCTGGAACTGCAGTTGTGATTTTGACTGTGGCCTTATGGACGCCTGCCACGAAACGGGGGAATGTCTTGAACTAGCGATGGAAATTTCAGAGGTTTGCTATCACTGAGGTACCCGCAAAAACGAAGATGCTGGGAGAAAACTTTACTATTTCACATCACTTTGGAATGAAAATGTGATAACATGACAAGCTACTGTTAATGATTTCTGCACAACTAGTAACTATTTTGACTCTTATATCTAACATAACCAAGCCCTTAAACTTATGTCATTGGTTAAAGGGGTAAAGAAGTGCTTCCGATTTGTTGAGGTGAGTGGCTTTCACTTAAATAACATAAGACTTCCTGTAAAACAGGCTTCTCGacaaaaagtgtgttttgatACACTATCGAACTGATCAAATACTGAGAACAGAAATAAACTCGCAAGCACTTTCAAGTTTGGCATCGAAAGGCCGATGAAATGATTCTATCAGCTTTACTAGGTAAACAGTTCTACACAATAACAGGCCCTTGTGTCAGCGTATGTCGATTTTTATCACAATGAAGAGCGAAGTGGAGAGAAAAAGCCTTCAGTGTGTCCCTGTGTATATGGCTTGTTTAAACTAGAGTGCAGTTGTTAACAGTCGGTTTGAGACGGTGTTTTGTAGGACACTTGTCCTTCTAGGGCCCATCAACCTTTGTTCTTCGTTCAGGAAGACTGCTCTCTCGAGTGCACGGCGACGGTGTAATAGATCGTTTTTGTCAGTGCCAGGCTCTCGTCACGTAATGGGGAAAGCGACActtttgtgcgtgtgtttgtgtgtatgtaattCAGGCGTCTATTTCAGGGAGAGGTCAAGGTAAGAGAACGATCACGCCAGGCAGTGGGCTGGAGTGTTATTGTGTTATCTTGGCTTgctaaacatttgttttcagttaTCAGATAGAGATACTAAAGGAGTAACTGGGTTgttcaaacaatacaaaaaccTCAGAGCGGTATGCCAAGAAGTGCTGTAATAGTGCTTTTTCCtgtgtaaaacaaaaagtcatggcataaaatatgacttaaaaatatgatttgctGGATTGCTGGGTTGTCGCAATGAGCACTTTCGCTGGATTTACCATATTAGCagcattatattttcatttgatttaaggCCTTACTAGcatgtaaaattaataactaCAAGAAAAATTGTATAGGCTGACATACAACATATGTATCAGAGGCCAAAATTGTTAGAACACATTATCACATGCTCAAAAGGttacagttgtttttgttgaattgGCTATTATAATAACCATAAAACTAAGTGTTGCCGGAAATACCTGCAATGGAAGGAATTTGCTGcactaaaacattaacaatgatGGACTGACCCACTCGAAGTCCGAATCCCATCGAGCAAATTCGGGCCAAATAAACTAGACATCTATTGTACATTTAAAGGAAAGCCTTTGACAGAGCTGCAGAAGGCTCGGGATAACAGTGGTTTTGACGTTCTCAGGAAATAAATGTACTGACACTGTACCAGATAGATGTGCTGCTGTAATTGCTGCAAAAGGTggacataaatattaaaaagtaaaaagtggaTAAAGATTGTACGACTCACTTCGTTTGATATTTATTGTGGTCAGAGCAGCCATCTGCATATTTCATGCAAATTAGGAAATTAAATCATgctttgaatgcaaaaaaaagggCAATATGTTCAGATCTGTCAAGTGTTCTAACAATGTTGGCCCCTATTGTGATTTCAAATGATGAATCACAATtgatcacattcaaaataaaagtgtttaaataaataatacaagtgtactgtatatttattatatataaa

Function

NR:

description
PREDICTED: myoD family inhibitor domain-containing protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69891 False 237 lncRNA 0.47 1 21350271 21350507
XM_043242021.1 True 2335 mRNA 0.41 5 21348619 21355381
XM_043242022.1 False 2317 mRNA 0.41 4 21348619 21355225
XM_043242023.1 False 2286 mRNA 0.41 3 21348619 21355092

Neighbor

gene id symbol gene type direction distance location
eevs eevs,LOC107599439,LOC107713488,LOC107750277,LOC107666977,LOC107584516,LOC106565742 coding downstream 22942 21322282 ~ 21325677 (-)
frmd4ba LOC107667002,LOC107680702,LOC107584470,LOC107599419,LOC107750236 coding downstream 45768 21262902 ~ 21302851 (-)
trnt1 trnt1,LOC107713507,LOC107667021,LOC107750237,LOC107680704 coding downstream 91190 21253706 ~ 21257429 (-)
avpr2b.1 si:dkey-178o16.4,LOC107599421,LOC107750238,LOC107584469,LOC107667040,LOC107713506 coding downstream 95048 21250404 ~ 21253571 (-)
lrrn1 lrrn1,LOC107713505,LOC107584468,LOC107667032,LOC107680720,LOC107750239 coding downstream 140256 21197505 ~ 21208363 (-)
foxp1b foxp1b,LOC107584474,LOC107750235,LOC107667004,LOC107599416,LOC107680700,LOC107713512 coding upstream 40404 21395785 ~ 21925135 (-)
LOC122347027 sephs1,LOC107686537,LOC107671154,LOC107719963,LOC107710385 coding upstream 426012 21781393 ~ 21787683 (-)
LOC122347024 LOC107710382,LOC107686534,LOC107560047,LOC107719970,LOC107671152,LOC107599867 coding upstream 434561 21789942 ~ 21795952 (-)
prok2 prok2,LOC107584519,LOC107713490,LOC107666985,LOC107599435,LOC107732044,LOC107680728 coding upstream 581421 21936802 ~ 21938944 (-)
rybpb rybpb,rybp,LOC107732045,LOC107599415,LOC107680715,LOC107713516,LOC107584476,LOC107667020 coding upstream 612726 21968107 ~ 21990701 (-)
G47122 zgc:113054,LOC107584471,LOC107713510,LOC107666963,LOC107750276,LOC107599438,LOC107680730,LOC108424032 non-coding downstream 18948 21328432 ~ 21329671 (-)
LOC122347045 gnat1,LOC101072412,LOC107750245,LOC107657824,LOC107385205,LOC107666988 non-coding downstream 205853 21137473 ~ 21142766 (-)
G47004 NA non-coding downstream 412965 20935422 ~ 20935654 (-)
G46934 srgap3,LOC107657972,LOC107712067,LOC107750258,LOC107673571 non-coding downstream 641770 20564351 ~ 20706849 (-)
G46922 NA non-coding downstream 656456 20498222 ~ 20692163 (-)
G47262 LOC107573738,LOC107657877,LOC107713495,LOC107666997,LOC107750247,LOC108436274 non-coding upstream 246908 21602289 ~ 21663492 (-)
G47283 NA non-coding upstream 444897 21800278 ~ 21801032 (-)
G47297 NA non-coding upstream 649399 22004780 ~ 22004982 (-)
G47306 gxylt2,LOC107713518,LOC107666964,LOC107584478,LOC107732048,LOC107599434,LOC107680697 non-coding upstream 691729 22047110 ~ 22047735 (-)
G47334 NA non-coding upstream 986741 22342122 ~ 22411439 (-)
G46926 NA other downstream 816785 20529179 ~ 20531834 (-)
G46840 synpr,LOC107658112,LOC107673482,LOC107584506,LOC107712113,LOC107567085,LOC108436247 other downstream 1182340 20161440 ~ 20166279 (-)
srsf3a LOC107712108,LOC107584442,LOC107673487,LOC107721197,LOC107667402 other downstream 1246160 20096024 ~ 20102459 (-)
mustn1a mustn1a other downstream 1347981 19998632 ~ 20000638 (-)
LOC122347177 LOC107584418 other downstream 1391889 19899672 ~ 19956730 (-)
tardbpb tardbp,LOC107713527,LOC107555974,LOC107666995,LOC107680706,LOC107561006 other upstream 1384591 22739972 ~ 22750947 (-)
G47535 LOC102793276,LOC101471251,LOC100701884,LOC102312415,LOC102199361 other upstream 1766402 23121783 ~ 23163157 (-)
G47590 NA other upstream 2043968 23399349 ~ 23400502 (-)
LOC122347542 grm8b,LOC107659486,LOC107698172,LOC107752348,LOC107575719,LOC107598887,LOC107753676 other upstream 2297808 23653189 ~ 23656456 (-)
G47627 NA other upstream 2319891 23675272 ~ 23676792 (-)

Expression


Co-expression Network