LOC122347542 (grm8b,LOC107659486,LOC107698172,LOC107752348,LOC107575719,LOC107598887,LOC107753676)


Basic Information

Item Value
gene id LOC122347542
gene name grm8b,LOC107659486,LOC107698172,LOC107752348,LOC107575719,LOC107598887,LOC107753676
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 23653189 ~ 23656456 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU70553
CTCTGAGCCTGAGTGCGTCCGTGTCTCTGGGGATGCTCTACATGCCCAAAGTCTACATCATTATCATGCACCCAGAGCAGAACGTGCCCAAACGCAAGCGCAGCTTCAAGGCCATCGTCACCGCTGCCACCATGACAAACAAGCTCAGCCAGCTGGCCAGCGAACGGCCCAATGGAGAGGTGAAAACCGAGCTCTGTGAAAGCGTGGACAATAGCAcacCGTCCACAAAAACAACCTACGCCAGCTACACCAATCATGCCATATGAGCGCGCATCCTGAAAACGGTTTGGCATGGACCTGGCTGGCTCCGACAAAACAGGATCCAATGACTGAAAACCAAGCATGAGACATCAGTGTTGTTTGTGGACAAGAGGATGGActcttggacttttttttttttttttctggatattTTATAAGAAAGCCTAGGCggccatccaaaaaaaaaaaaaaaaaaaaaaagaggagacaAAGCTGTCATTTACGTGGGCAGCCCATAAAATGAGACACTGGAAAAAGGTGTCAGACCTGCATTGGAAAATGCGTTTGTCTCTTGTATTGGCTACTCTGGTCTATAACCTCGGGTTGTG
>XM_043242904.1
GAGCCTGAGTGCGTCCGTGTCTCTGGGGATGCTCTACATGCCCAAAGTCTACATCATTATCATGCACCCAGAGCAGAACGTGCCCAAACGCAAGCGCAGCTTCAAGGCCATCGTCACCGCTGCCACCATGACAAACAAGCTCAGCCAGCTGGCCAGCGAACGGCCCAATGGAGAGGTGAAAACCGAGCTCTGTGAAAGCGTGGACAATAGCAcacCGTCCACAAAAACAACCTACGCCAGCTACACCAATCATGCCATATGAGCGCGCATCCTGAAAACGGTTTGGCATGGACCTGGCTGGCTCCGACAAAACAGGATCCAATGACTGAAAACCAAGCATGAGACATCAGTGTTGTTTGTGGACAAGAGGATGGActcttggacttttttttttttttttctggatattTTATAAGAAAGCCTAGGCggccatccaaaaaaaaaaaaaaaaaaaaaaagaggagacaAAGCTGTCATTTACGTGGGCAGCCCATAAAATGAGACACTGGAAAAAGGTGTCAGACCTGCATTGGAAAATGCGTTTGTCTCTTGTATTGGCTACTCTGGTCTATAACCTCGGGTTGTGAGTGTGCAAATGCCATGGTTGAAGCATGC

Function

symbol description
grm8b Predicted to enable group III metabotropic glutamate receptor activity. Predicted to be involved in G protein-coupled glutamate receptor signaling pathway and regulation of glutamatergic synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain and sensory system. Human ortholog(s) of this gene implicated in attention deficit hyperactivity disorder; autistic disorder; and schizophrenia. Orthologous to human GRM8 (glutamate metabotropic receptor 8).

NR:

description
PREDICTED: metabotropic glutamate receptor 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70553 False 590 TUCP 0.48 3 23653218 23656456
XM_043242904.1 True 615 mRNA 0.48 3 23653189 23656452

Neighbor

gene id symbol gene type direction distance location
LOC122347539 csk,LOC107753654,LOC107661474,LOC107554945,LOC107716707,LOC107678300 coding downstream 264312 23386976 ~ 23388877 (-)
LOC122347540 LOC107753702,LOC107716657,LOC107576377,LOC107678284,LOC107554944,LOC107661513,LOC103033419 coding downstream 270681 23380319 ~ 23382508 (-)
LOC122347543 adal,LOC107753575 coding downstream 273218 23375526 ~ 23379971 (-)
LOC122347531 LOC107716719,LOC107661465,LOC107753586,LOC107696249,LOC107574055 coding downstream 346145 23281168 ~ 23307044 (-)
igfn1.1 LOC107713542,LOC107667005,LOC107678150 coding downstream 532320 23096476 ~ 23120869 (-)
im:7151449 NA coding upstream 174389 23830845 ~ 23837357 (-)
LOC122347530 LOC564220,LOC107549303,LOC107666974,LOC107569295,LOC108427579,LOC107668158 coding upstream 183775 23840231 ~ 23938647 (-)
lrig2 lrig2,LOC107708168,LOC107666103,LOC107655772,LOC107729721 coding upstream 285998 23942454 ~ 23955000 (-)
slc2a1b slc2a1b,LOC107729743,LOC107549315,LOC107666081,LOC107708165,LOC107569806 coding upstream 403944 24060400 ~ 24073551 (-)
st7l st7l,LOC107655782,LOC107666110 coding upstream 493001 24149457 ~ 24160758 (-)
G47523 NA non-coding downstream 637576 23014864 ~ 23015613 (-)
G47508 LOC107680689,LOC107561011,LOC107713535 non-coding downstream 741156 22911471 ~ 22912033 (-)
G47435 NA non-coding downstream 768356 22883663 ~ 22884833 (-)
G47412 NA non-coding downstream 942561 22697899 ~ 22710628 (-)
G47334 NA non-coding downstream 1241750 22342122 ~ 22411439 (-)
G47863 NA non-coding upstream 389328 24045784 ~ 24048986 (-)
G47860 NA non-coding upstream 402118 24058574 ~ 24059263 (-)
LOC122346445 NA non-coding upstream 419540 24075996 ~ 24077407 (-)
LOC122347497 NA non-coding upstream 424462 24080918 ~ 24088360 (-)
G47904 NA non-coding upstream 632518 24288974 ~ 24361963 (-)
G47590 NA other downstream 252687 23399349 ~ 23400502 (-)
G47535 LOC102793276,LOC101471251,LOC100701884,LOC102312415,LOC102199361 other downstream 490032 23121783 ~ 23163157 (-)
tardbpb tardbp,LOC107713527,LOC107555974,LOC107666995,LOC107680706,LOC107561006 other downstream 902242 22739972 ~ 22750947 (-)
mdfic2 LOC107667017,LOC107713509,LOC107584472,LOC107680698,LOC107599432 other downstream 2297808 21348619 ~ 21355381 (-)
G46926 NA other downstream 3121355 20529179 ~ 20531834 (-)
G47627 NA other upstream 18816 23675272 ~ 23676792 (-)
rap1gapb si:dkey-166d12.2,LOC107708062,LOC107655773,LOC107666145,LOC107729774 other upstream 311065 23967521 ~ 24038319 (-)
ngfb LOC107708095,LOC107596860,LOC107729735,LOC107666043,LOC107554201,LOC107685837 other upstream 823369 24479825 ~ 24517032 (-)
rps26l RPS26,LOC107708153,LOC107596838,LOC107685843,LOC107666027,LOC107554198 other upstream 928906 24585362 ~ 24587331 (-)
atp5f1e NA other upstream 1089941 24746397 ~ 24747264 (-)

Expression


Co-expression Network