brinp3a.1 (brinp3a.1,LOC107585174,LOC107711117,LOC107732447,LOC107685317,LOC107564080)


Basic Information

Item Value
gene id brinp3a.1
gene name brinp3a.1,LOC107585174,LOC107711117,LOC107732447,LOC107685317,LOC107564080
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16898685 ~ 16926368 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240970.1
CATCCGACATACGCGCAGTTGCACAGAGTGGTCCTCCGGAGTCTACGTTTATTTAGTGCTTCTTGGACACCAGGTTAAGTTAATGTGTCTGCCGAGGGGAAACGGTAGACTTTAATCGCGTCAGTCGTTAAAGGTTATGGGATTGCTTCACCGTAACTTCAAATTCATAAGAGACCTGTCTACCTGGAGAGAGAAGAGTGAAGACAGAGCGACCGCGAtagttttttcttctcttcaccCGGATTATACGCCACAAGACGTTGGAAATATATTCGCTAGCGGAAGCAGAGAGTTGGATGCTGGTTTTCCAGGGCTCTTCTCGCTTCGCGATGGTGTCTAAAACAAGTTGAACTGAGCCAAATTTTCAAAGGTCACCCTCAACAGTCTCCCTATGATTTGCTTTTAACTATAGAACTGTAGAGGTTGACTTCAGTGGCAGAAACATCGGACACCTGGAGAAGAAGGCGAGGAAAGTTTGGAGAGAATGTCGAGTCGCAGGGTGAAGCATGAGCTGCCAGTGTACTGATTTTAGACTGGCGTATCTGATGAGTCTATGGGTGTGTGTTGTACTAAGCCTTCACTGCTGGGTTCTAGCCCCTGTGGCAGCCTCCCATGATGCCGCTGGTCCATTTGGGTGGCTCCTTTCAGATAAAGGGCCTTTTCATCACTCACAGGAATTTGCAGAATTTGTGGAGCGTTATCAGCAGGGCTTCACAACCAAATATAAGATTTACAGAGAGTTTGGGCGCTGGAAGGTGAACAGCCTGGCTCTGGAGAGAGAGGACAATGGCGTGGCTCTACCCCTCGATCCAGAGTTCATGCAGACCATCAGACAGTTGGGCCGCAGACCCACCCTCGGTGCCATTACCGAGAACATCATCAGGAAATATGGCACACACTTTCTGCTTTCAGCTACACTCGGAGGTGAGGAGGCGTTGACTATATTTGTGGACAAGAGGAGGCTAAGCCGGACGGCGGACCTGACTGACTCAAATGGCACGGCTGTGACTCTGGAGGCCCTGCACCAGCTGGCTGCCTCCTACTTCATAGACAGAGAGAGCACTCTGCGCAAACTGCACCACCTCCAGATTGCTTCCACTGCCATCAAGGTGACCGAAACAAGGACAGGCCCTCTTGGATGCAGTAACTATGACAACCTCGATTCTGTCAGTTCCGTTTTGGTTCAGAGCCCTGAAAACAAGATTCATCTACAAGGGCTTCAGGCCATTCTGCCAGAATACCTAAGGAGCAGATTTGTGGAGGCAGCTCTCAGTTATATCGGCTGCCACTCcgagggtgagtttgtgtgccgGGATAATGACTGCTGGTGCAAATGCAGTGTCGATTATCCCCAGTGCAACTGTCCCAGTGAAGACCTGAAGGCTATGCAGGACAGCCTGAAACTCATCAGAGAATCATGGGTGCAAGCCAACCAAGAGTTTGAAGAGTCTGAGGACTTCCAAAATTTTGTGAGGAGATTACCCACGTTCTATGCTCTGAACACATCTGCTGTGCAGTACTTTTGGAAGATGGACCCTGGCGTTCAACAACGCTTTCTGCTGCTGGAGACTAGCACTCAACAGCTGCTCAGCAAAGCGCAGCGGATTGTCGGCAAACTCTTCAAACTCAGCAAAAGGTGTCGGACTCAGCCCAAAATATCTGTGCTCAGAGAGAGGCCTCTCAGCTACTGGCTGAGGTATATCCTCTCCATCATGTACTGCAGTGAGAACAATCAGATAGGCTCCTACATGGAGGAAACCCGGACCTGCTCCTGTCATTACGAGCACCCATCCTGCCAGGGAGTTATTCCGTGCTCCGTAGGCGACGGCCCTCACTGCGCCTCCTGCTCCTACGAGAACCGCTCTCGCTGTGCCAGCTGCAATCCCGGCTACATGCTGAGCCAAGGAACCTGTAGGAATACCATCCCGGATTCTACCGACAACTACATCGGGTTCGAGACGGACCTTCAGGACATGGAGCTGCGCTACCTGCTGCAAAAGAAAGACGGGCGGATCAGTATTCACGCCATGTTCATAAGCAATGACGTCAGACTCAACAACTGGTTCGATCCCAGCTGGAGGAAGAGGATGCTGCTGACGCTGAAGAGCAACAAGTTCAAATCTAGCCACGTTCACATGCTCCTAGGGATCTCCCTGCAGATATGCCTTACTAAAAACAGCACCCTGGAACCCGTGCTGTCCGTCTACATCAATCCATTCGGAGGTAGTCATTCTGAGAGCTGGATCATGCCAATTGACCAGAACAATTACCCTGACTGGGAAAGGACCAAGTTAGACATCCCGCTTGACTGTTATAACTGGACCCTGACTTTAGGAAACAAGTGGAAGACCTTTTTTGAGACGGTACACATTTACCTGAGGAGCCGCGTAAAAACGGCATCGGCTCAAGGGAACGGCAGCGTCCATTTTGAGCCATTGGAATACATGGACTCGTCCCGTAACCTGGGCTACATGAAAATCAACAGTATGCAGGTGTTCGGATATAGTATGCACTTTGATCCGGATGCCATTCAGGACTTGATCCTGCAGCTGGACTACCCGTACACGCAGGGCTCGCAGGACTCGGCCTTGCTCCAGCTGCTGGAGATCCGAGACCGGGTCAACCGACTCTCTCCACCGGGACAGCAACCTCTGGATCTGTTCGCCTGCTTATTACGCCACCGTCTTAAACTCTCTACCACCGATGTGGTCCGAATCCAGACTGCTCTTCAGGCCTTCAGCGCCAAGCAGCCCAACTCAATGGAGTATGAAACTACCAAACTATGTAGCTAAAAAGCCGCTGCAAGGTAGCAGTATATTTGTAGCTATTTCAGTAACTGTAGTTTAACGACCTGATATACATtcggacaaaaacaaaagcatcgGACAGCTGCTGGGGATACAGTGTTGATGGTGATGCCAGAGTTCTGGTTTGAAGCACTGATGTAATGCGCCACTTCAGAAGAATGGCCAAACCTTttgccttttcttttcttaactGCTATGACGATTTACGGTAACTCATAGCGAGCTCATAATGACCTCATCTCAGTTTCTGCAGAATTTAGCATCAGCCCCTGTCCTGATAAACAATGTGTGCGGTAGAACTCGTCCGGgtcttttgatttttaaaagtgacttttattttcacCTCTTTATTCTCTGCAAGCATAACAGAGGCCGTGAACACATGGTGAGCCAAACCTTGTTAGTGTAATCAGGGGTTCCTGCTGTGTCTGGGCAGAATTCCGACTtcttttagggttttttttcgCCTTTTCTATGCTGTCTGTCAACACTGTAACTCTCAAAAATATCAGTATCCTAATCAACAATAGATGGTTTTGTTGAtgcttaaaactatttttatggtATTCGTTGGAATATGAATGTAGGAGGAAAGCTGTTTAAAAATCTCAACACCATAAGCAAGGTACTTATTATATATGCTGTttcatgtacatttatttttataaaatctatTATTTGTGACAAGTTACAAAGGTAATGTCCATACAATGTATAGAACATTTGTTAATACtctaaataaaagtcatttttatgtgCCGTCTGTAAA
>XM_043240971.1
CATCCGACATACGCGCAGTTGCACAGAGTGGTCCTCCGGAGTCTACGTTTATTTAGTGCTTCTTGGACACCAGGTTAAGTTAATGTGTCTGCCGAGGGGAAACGGTAGACTTTAATCGCGTCAGTCGTTAAAGGTTATGGGATTGCTTCACCGTAACTTCAAATTCATAAGAGACCTGTCTACCTGGAGAGAGAAGAGTGAAGACAGAGCGACCGCGAtagttttttcttctcttcaccCGGATTATACGCCACAAGACGTTGGAAATATATTCGCTAGCGGAAGCAGAGAGTTGGATGCTGGTTTTCCAGGGCTCTTCTCGCTTCGCGATGGTGTCTAAAACAAGTTGAACTGAGCCAAATTTTCAAAGGTCACCCTCAACAGTCTCCCTATGATTTGCTTTTAACTATAGAACTGTAGAGGTTGACTTCAGTGGCAGAAACATCGGACACCTGGAGAAGGCGAGGAAAGTTTGGAGAGAATGTCGAGTCGCAGGGTGAAGCATGAGCTGCCAGTGTACTGATTTTAGACTGGCGTATCTGATGAGTCTATGGGTGTGTGTTGTACTAAGCCTTCACTGCTGGGTTCTAGCCCCTGTGGCAGCCTCCCATGATGCCGCTGGTCCATTTGGGTGGCTCCTTTCAGATAAAGGGCCTTTTCATCACTCACAGGAATTTGCAGAATTTGTGGAGCGTTATCAGCAGGGCTTCACAACCAAATATAAGATTTACAGAGAGTTTGGGCGCTGGAAGGTGAACAGCCTGGCTCTGGAGAGAGAGGACAATGGCGTGGCTCTACCCCTCGATCCAGAGTTCATGCAGACCATCAGACAGTTGGGCCGCAGACCCACCCTCGGTGCCATTACCGAGAACATCATCAGGAAATATGGCACACACTTTCTGCTTTCAGCTACACTCGGAGGTGAGGAGGCGTTGACTATATTTGTGGACAAGAGGAGGCTAAGCCGGACGGCGGACCTGACTGACTCAAATGGCACGGCTGTGACTCTGGAGGCCCTGCACCAGCTGGCTGCCTCCTACTTCATAGACAGAGAGAGCACTCTGCGCAAACTGCACCACCTCCAGATTGCTTCCACTGCCATCAAGGTGACCGAAACAAGGACAGGCCCTCTTGGATGCAGTAACTATGACAACCTCGATTCTGTCAGTTCCGTTTTGGTTCAGAGCCCTGAAAACAAGATTCATCTACAAGGGCTTCAGGCCATTCTGCCAGAATACCTAAGGAGCAGATTTGTGGAGGCAGCTCTCAGTTATATCGGCTGCCACTCcgagggtgagtttgtgtgccgGGATAATGACTGCTGGTGCAAATGCAGTGTCGATTATCCCCAGTGCAACTGTCCCAGTGAAGACCTGAAGGCTATGCAGGACAGCCTGAAACTCATCAGAGAATCATGGGTGCAAGCCAACCAAGAGTTTGAAGAGTCTGAGGACTTCCAAAATTTTGTGAGGAGATTACCCACGTTCTATGCTCTGAACACATCTGCTGTGCAGTACTTTTGGAAGATGGACCCTGGCGTTCAACAACGCTTTCTGCTGCTGGAGACTAGCACTCAACAGCTGCTCAGCAAAGCGCAGCGGATTGTCGGCAAACTCTTCAAACTCAGCAAAAGGTGTCGGACTCAGCCCAAAATATCTGTGCTCAGAGAGAGGCCTCTCAGCTACTGGCTGAGGTATATCCTCTCCATCATGTACTGCAGTGAGAACAATCAGATAGGCTCCTACATGGAGGAAACCCGGACCTGCTCCTGTCATTACGAGCACCCATCCTGCCAGGGAGTTATTCCGTGCTCCGTAGGCGACGGCCCTCACTGCGCCTCCTGCTCCTACGAGAACCGCTCTCGCTGTGCCAGCTGCAATCCCGGCTACATGCTGAGCCAAGGAACCTGTAGGAATACCATCCCGGATTCTACCGACAACTACATCGGGTTCGAGACGGACCTTCAGGACATGGAGCTGCGCTACCTGCTGCAAAAGAAAGACGGGCGGATCAGTATTCACGCCATGTTCATAAGCAATGACGTCAGACTCAACAACTGGTTCGATCCCAGCTGGAGGAAGAGGATGCTGCTGACGCTGAAGAGCAACAAGTTCAAATCTAGCCACGTTCACATGCTCCTAGGGATCTCCCTGCAGATATGCCTTACTAAAAACAGCACCCTGGAACCCGTGCTGTCCGTCTACATCAATCCATTCGGAGGTAGTCATTCTGAGAGCTGGATCATGCCAATTGACCAGAACAATTACCCTGACTGGGAAAGGACCAAGTTAGACATCCCGCTTGACTGTTATAACTGGACCCTGACTTTAGGAAACAAGTGGAAGACCTTTTTTGAGACGGTACACATTTACCTGAGGAGCCGCGTAAAAACGGCATCGGCTCAAGGGAACGGCAGCGTCCATTTTGAGCCATTGGAATACATGGACTCGTCCCGTAACCTGGGCTACATGAAAATCAACAGTATGCAGGTGTTCGGATATAGTATGCACTTTGATCCGGATGCCATTCAGGACTTGATCCTGCAGCTGGACTACCCGTACACGCAGGGCTCGCAGGACTCGGCCTTGCTCCAGCTGCTGGAGATCCGAGACCGGGTCAACCGACTCTCTCCACCGGGACAGCAACCTCTGGATCTGTTCGCCTGCTTATTACGCCACCGTCTTAAACTCTCTACCACCGATGTGGTCCGAATCCAGACTGCTCTTCAGGCCTTCAGCGCCAAGCAGCCCAACTCAATGGAGTATGAAACTACCAAACTATGTAGCTAAAAAGCCGCTGCAAGGTAGCAGTATATTTGTAGCTATTTCAGTAACTGTAGTTTAACGACCTGATATACATtcggacaaaaacaaaagcatcgGACAGCTGCTGGGGATACAGTGTTGATGGTGATGCCAGAGTTCTGGTTTGAAGCACTGATGTAATGCGCCACTTCAGAAGAATGGCCAAACCTTttgccttttcttttcttaactGCTATGACGATTTACGGTAACTCATAGCGAGCTCATAATGACCTCATCTCAGTTTCTGCAGAATTTAGCATCAGCCCCTGTCCTGATAAACAATGTGTGCGGTAGAACTCGTCCGGgtcttttgatttttaaaagtgacttttattttcacCTCTTTATTCTCTGCAAGCATAACAGAGGCCGTGAACACATGGTGAGCCAAACCTTGTTAGTGTAATCAGGGGTTCCTGCTGTGTCTGGGCAGAATTCCGACTtcttttagggttttttttcgCCTTTTCTATGCTGTCTGTCAACACTGTAACTCTCAAAAATATCAGTATCCTAATCAACAATAGATGGTTTTGTTGAtgcttaaaactatttttatggtATTCGTTGGAATATGAATGTAGGAGGAAAGCTGTTTAAAAATCTCAACACCATAAGCAAGGTACTTATTATATATGCTGTttcatgtacatttatttttataaaatctatTATTTGTGACAAGTTACAAAGGTAATGTCCATACAATGTATAGAACATTTGTTAATACtctaaataaaagtcatttttatgtgCCGTCTGTAAA

Function

symbol description
brinp3a.1 Predicted to be involved in cellular response to retinoic acid; negative regulation of mitotic cell cycle; and positive regulation of neuron differentiation. Predicted to act upstream of or within regulation of cell cycle. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite; endoplasmic reticulum; and neuronal cell body. Is expressed in brain; gill; head; muscle; and trunk. Human ortholog(s) of this gene implicated in coronary artery disease and myocardial infarction. Orthologous to human BRINP3 (BMP/retinoic acid inducible neural specific 3).

NR:

description
PREDICTED: BMP/retinoic acid-inducible neural-specific protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240970.1 True 3576 mRNA 0.48 8 16898685 16926368
XM_043240971.1 False 3573 mRNA 0.48 8 16898685 16926368

Neighbor

gene id symbol gene type direction distance location
rgs16 rgs16,LOC107684360,LOC107711030,LOC107551031,LOC107732438,LOC107564088,LOC107685341 coding downstream 88888 16807611 ~ 16809797 (-)
rgs5a rgs5a,LOC107684230,LOC107732440,LOC107564083,LOC107685321,LOC108441543 coding downstream 102533 16788677 ~ 16796152 (-)
nos1apa nos1ap,LOC107711121,LOC107594625 coding downstream 134411 16687378 ~ 16764274 (-)
LOC122346973 LOC107551033,LOC107711121,LOC107684213,LOC107732445,LOC107692421,LOC107594625 coding downstream 215252 16676285 ~ 16683433 (-)
uap1 uap1,LOC107724142,LOC107551035,LOC107692418 coding downstream 238952 16649465 ~ 16659733 (-)
LOC122347243 LOC107551033,LOC107711121,LOC107684213,LOC107732445,LOC107692421,LOC107594625 coding upstream 291619 17217987 ~ 17224910 (-)
LOC122346427 her6,LOC107680502,LOC107722674,LOC107711114,LOC107582845,LOC107685314 coding upstream 627135 17553503 ~ 17555239 (-)
LOC122346430 her6,LOC107680502,LOC107722674,LOC107711114,LOC107582845,LOC107685314 coding upstream 741819 17668187 ~ 17669843 (-)
LOC122347583 LOC107711009 coding upstream 1067602 17993970 ~ 17996739 (-)
LOC122346727 cth,LOC107582733,LOC107685307,LOC107673555,LOC107585163,LOC107585162 coding upstream 1088870 18015238 ~ 18024042 (-)
G45770 NA non-coding downstream 575880 16320413 ~ 16322805 (-)
G45753 NA non-coding downstream 627577 16270902 ~ 16271108 (-)
G45752 NA non-coding downstream 629293 16268915 ~ 16269392 (-)
G45751 NA non-coding downstream 631143 16267183 ~ 16267542 (-)
G45709 NA non-coding downstream 780099 15902216 ~ 16118586 (-)
G45897 NA non-coding upstream 261088 17187456 ~ 17187794 (-)
G45930 LOC107582740,LOC107685313,LOC107722678 non-coding upstream 588270 17514638 ~ 17518605 (-)
G45993 NA non-coding upstream 881253 17807621 ~ 17808115 (-)
G46000 NA non-coding upstream 896168 17822536 ~ 17822735 (-)
LOC122346731 nit2,LOC107585165,LOC107673472,LOC107582734,LOC107685305 non-coding upstream 1113996 18040364 ~ 18044630 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other downstream 68424 16816640 ~ 16830261 (-)
fam183a fam183a,LOC107551015 other downstream 534665 16361167 ~ 16364020 (-)
G45731 LOC107692397,LOC107556985,LOC107717145,LOC106584012 other downstream 838219 16059893 ~ 16060466 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other downstream 838918 16058968 ~ 16059767 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other downstream 1133578 15756309 ~ 15765107 (-)
G45895 NA other upstream 260321 17186689 ~ 17187318 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other upstream 309422 17235790 ~ 17246386 (-)
G45910 NA other upstream 381447 17307815 ~ 17308478 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other upstream 455959 17382327 ~ 17414139 (-)
opa1 opa1,LOC107585173,LOC107711112,LOC107582739,LOC107673572,LOC107722677 other upstream 817347 17743715 ~ 17774107 (-)

Expression


Co-expression Network